Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Zfp783-201ENSMUST00000095946 670 ntBASIC18.67■□□□□ 0.58
Pcdhb1Q91Y08 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb1Q91Y08 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Pcdhb1Q91Y08 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb1Q91Y08 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb1Q91Y08 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb1Q91Y08 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.66■□□□□ 0.58
Pcdhb1Q91Y08 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Pcdhb1Q91Y08 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb1Q91Y08 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb1Q91Y08 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb1Q91Y08 Gm10602-201ENSMUST00000098239 609 ntBASIC18.66■□□□□ 0.58
Pcdhb1Q91Y08 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.66■□□□□ 0.58
Pcdhb1Q91Y08 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb1Q91Y08 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb1Q91Y08 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.65■□□□□ 0.58
Pcdhb1Q91Y08 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb1Q91Y08 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb1Q91Y08 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.65■□□□□ 0.58
Pcdhb1Q91Y08 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.65■□□□□ 0.58
Pcdhb1Q91Y08 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb1Q91Y08 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb1Q91Y08 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Pcdhb1Q91Y08 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.65■□□□□ 0.58
Pcdhb1Q91Y08 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb1Q91Y08 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.65■□□□□ 0.58
Pcdhb1Q91Y08 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb1Q91Y08 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb1Q91Y08 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.65■□□□□ 0.58
Pcdhb1Q91Y08 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.65■□□□□ 0.58
Pcdhb1Q91Y08 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdhb1Q91Y08 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb1Q91Y08 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb1Q91Y08 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb1Q91Y08 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb1Q91Y08 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb1Q91Y08 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.64■□□□□ 0.57
Pcdhb1Q91Y08 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb1Q91Y08 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb1Q91Y08 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb1Q91Y08 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Pcdhb1Q91Y08 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Pcdhb1Q91Y08 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb1Q91Y08 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb1Q91Y08 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb1Q91Y08 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb1Q91Y08 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb1Q91Y08 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb1Q91Y08 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.63■□□□□ 0.57
Pcdhb1Q91Y08 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.63■□□□□ 0.57
Pcdhb1Q91Y08 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.63■□□□□ 0.57
Pcdhb1Q91Y08 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.63■□□□□ 0.57
Pcdhb1Q91Y08 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb1Q91Y08 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb1Q91Y08 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb1Q91Y08 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb1Q91Y08 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb1Q91Y08 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb1Q91Y08 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb1Q91Y08 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb1Q91Y08 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb1Q91Y08 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb1Q91Y08 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcdhb1Q91Y08 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb1Q91Y08 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb1Q91Y08 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb1Q91Y08 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb1Q91Y08 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.62■□□□□ 0.57
Pcdhb1Q91Y08 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Pcdhb1Q91Y08 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb1Q91Y08 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb1Q91Y08 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb1Q91Y08 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb1Q91Y08 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Pcdhb1Q91Y08 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb1Q91Y08 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb1Q91Y08 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb1Q91Y08 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb1Q91Y08 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Pcdhb1Q91Y08 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb1Q91Y08 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb1Q91Y08 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcdhb1Q91Y08 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Pcdhb1Q91Y08 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
Pcdhb1Q91Y08 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb1Q91Y08 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb1Q91Y08 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb1Q91Y08 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb1Q91Y08 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Pcdhb1Q91Y08 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.61■□□□□ 0.57
Pcdhb1Q91Y08 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb1Q91Y08 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb1Q91Y08 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb1Q91Y08 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb1Q91Y08 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
Pcdhb1Q91Y08 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb1Q91Y08 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb1Q91Y08 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb1Q91Y08 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb1Q91Y08 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms