Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Pcdhb3Q91XZ7 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb3Q91XZ7 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb3Q91XZ7 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb3Q91XZ7 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb3Q91XZ7 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb3Q91XZ7 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdhb3Q91XZ7 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb3Q91XZ7 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb3Q91XZ7 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Pcdhb3Q91XZ7 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.89■□□□□ 0.45
Pcdhb3Q91XZ7 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Pcdhb3Q91XZ7 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb3Q91XZ7 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Pcdhb3Q91XZ7 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.89■□□□□ 0.45
Pcdhb3Q91XZ7 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Pcdhb3Q91XZ7 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb3Q91XZ7 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Pcdhb3Q91XZ7 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb3Q91XZ7 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb3Q91XZ7 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Pcdhb3Q91XZ7 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.88■□□□□ 0.45
Pcdhb3Q91XZ7 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb3Q91XZ7 Haglr-201ENSMUST00000100000 2085 ntBASIC17.88■□□□□ 0.45
Pcdhb3Q91XZ7 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb3Q91XZ7 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb3Q91XZ7 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.88■□□□□ 0.45
Pcdhb3Q91XZ7 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb3Q91XZ7 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb3Q91XZ7 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb3Q91XZ7 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb3Q91XZ7 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.88■□□□□ 0.45
Pcdhb3Q91XZ7 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
Pcdhb3Q91XZ7 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
Pcdhb3Q91XZ7 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
Pcdhb3Q91XZ7 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb3Q91XZ7 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb3Q91XZ7 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb3Q91XZ7 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb3Q91XZ7 Gm42642-201ENSMUST00000200683 355 ntBASIC17.87■□□□□ 0.45
Pcdhb3Q91XZ7 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb3Q91XZ7 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb3Q91XZ7 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb3Q91XZ7 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb3Q91XZ7 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb3Q91XZ7 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb3Q91XZ7 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb3Q91XZ7 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Pcdhb3Q91XZ7 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb3Q91XZ7 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.86■□□□□ 0.45
Pcdhb3Q91XZ7 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb3Q91XZ7 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb3Q91XZ7 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb3Q91XZ7 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb3Q91XZ7 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Pcdhb3Q91XZ7 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Pcdhb3Q91XZ7 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Pcdhb3Q91XZ7 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb3Q91XZ7 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Pcdhb3Q91XZ7 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb3Q91XZ7 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb3Q91XZ7 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb3Q91XZ7 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb3Q91XZ7 Gm10849-201ENSMUST00000100397 618 ntBASIC17.85■□□□□ 0.45
Pcdhb3Q91XZ7 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb3Q91XZ7 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.85■□□□□ 0.45
Pcdhb3Q91XZ7 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.85■□□□□ 0.45
Pcdhb3Q91XZ7 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.85■□□□□ 0.45
Pcdhb3Q91XZ7 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb3Q91XZ7 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb3Q91XZ7 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb3Q91XZ7 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb3Q91XZ7 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Pcdhb3Q91XZ7 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb3Q91XZ7 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb3Q91XZ7 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb3Q91XZ7 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.84■□□□□ 0.45
Pcdhb3Q91XZ7 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb3Q91XZ7 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb3Q91XZ7 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb3Q91XZ7 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.84■□□□□ 0.45
Pcdhb3Q91XZ7 Gm26571-201ENSMUST00000181399 666 ntBASIC17.84■□□□□ 0.45
Pcdhb3Q91XZ7 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb3Q91XZ7 Gm7291-201ENSMUST00000199147 382 ntBASIC17.84■□□□□ 0.45
Pcdhb3Q91XZ7 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Pcdhb3Q91XZ7 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb3Q91XZ7 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb3Q91XZ7 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb3Q91XZ7 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb3Q91XZ7 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Pcdhb3Q91XZ7 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb3Q91XZ7 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb3Q91XZ7 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb3Q91XZ7 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb3Q91XZ7 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb3Q91XZ7 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb3Q91XZ7 Gm42569-201ENSMUST00000200539 472 ntBASIC17.83■□□□□ 0.44
Pcdhb3Q91XZ7 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.83■□□□□ 0.44
Pcdhb3Q91XZ7 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb3Q91XZ7 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms