Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb4Q91XZ6 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb4Q91XZ6 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb4Q91XZ6 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb4Q91XZ6 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb4Q91XZ6 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pcdhb4Q91XZ6 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.8■□□□□ 0.44
Pcdhb4Q91XZ6 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb4Q91XZ6 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb4Q91XZ6 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Pcdhb4Q91XZ6 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Pcdhb4Q91XZ6 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pcdhb4Q91XZ6 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb4Q91XZ6 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb4Q91XZ6 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdhb4Q91XZ6 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb4Q91XZ6 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb4Q91XZ6 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb4Q91XZ6 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Pcdhb4Q91XZ6 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb4Q91XZ6 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.79■□□□□ 0.44
Pcdhb4Q91XZ6 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb4Q91XZ6 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb4Q91XZ6 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
Pcdhb4Q91XZ6 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
Pcdhb4Q91XZ6 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb4Q91XZ6 Gm18284-201ENSMUST00000172604 624 ntBASIC17.79■□□□□ 0.44
Pcdhb4Q91XZ6 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb4Q91XZ6 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdhb4Q91XZ6 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb4Q91XZ6 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb4Q91XZ6 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb4Q91XZ6 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.79■□□□□ 0.44
Pcdhb4Q91XZ6 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb4Q91XZ6 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdhb4Q91XZ6 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhb4Q91XZ6 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb4Q91XZ6 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb4Q91XZ6 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb4Q91XZ6 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb4Q91XZ6 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb4Q91XZ6 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb4Q91XZ6 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb4Q91XZ6 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb4Q91XZ6 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb4Q91XZ6 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb4Q91XZ6 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb4Q91XZ6 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb4Q91XZ6 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb4Q91XZ6 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb4Q91XZ6 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb4Q91XZ6 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb4Q91XZ6 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Pcdhb4Q91XZ6 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Pcdhb4Q91XZ6 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb4Q91XZ6 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb4Q91XZ6 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
Pcdhb4Q91XZ6 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb4Q91XZ6 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb4Q91XZ6 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb4Q91XZ6 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb4Q91XZ6 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb4Q91XZ6 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.77■□□□□ 0.43
Pcdhb4Q91XZ6 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhb4Q91XZ6 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb4Q91XZ6 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb4Q91XZ6 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb4Q91XZ6 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhb4Q91XZ6 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb4Q91XZ6 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb4Q91XZ6 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb4Q91XZ6 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb4Q91XZ6 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb4Q91XZ6 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb4Q91XZ6 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb4Q91XZ6 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb4Q91XZ6 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb4Q91XZ6 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb4Q91XZ6 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb4Q91XZ6 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb4Q91XZ6 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb4Q91XZ6 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.75■□□□□ 0.43
Pcdhb4Q91XZ6 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcdhb4Q91XZ6 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb4Q91XZ6 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb4Q91XZ6 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb4Q91XZ6 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb4Q91XZ6 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb4Q91XZ6 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcdhb4Q91XZ6 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb4Q91XZ6 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb4Q91XZ6 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb4Q91XZ6 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb4Q91XZ6 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb4Q91XZ6 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb4Q91XZ6 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb4Q91XZ6 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb4Q91XZ6 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Pcdhb4Q91XZ6 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Pcdhb4Q91XZ6 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms