Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga4Q91XY4 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga4Q91XY4 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga4Q91XY4 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.65■□□□□ 0.42
Pcdhga4Q91XY4 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga4Q91XY4 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhga4Q91XY4 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga4Q91XY4 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga4Q91XY4 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga4Q91XY4 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhga4Q91XY4 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Pcdhga4Q91XY4 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdhga4Q91XY4 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.64■□□□□ 0.41
Pcdhga4Q91XY4 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhga4Q91XY4 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhga4Q91XY4 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhga4Q91XY4 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.64■□□□□ 0.41
Pcdhga4Q91XY4 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Pcdhga4Q91XY4 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Pcdhga4Q91XY4 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhga4Q91XY4 Gm27011-201ENSMUST00000182352 972 ntBASIC17.64■□□□□ 0.41
Pcdhga4Q91XY4 Gm2559-201ENSMUST00000201323 363 ntBASIC17.64■□□□□ 0.41
Pcdhga4Q91XY4 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhga4Q91XY4 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhga4Q91XY4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhga4Q91XY4 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Pcdhga4Q91XY4 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.64■□□□□ 0.41
Pcdhga4Q91XY4 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhga4Q91XY4 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhga4Q91XY4 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhga4Q91XY4 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhga4Q91XY4 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.63■□□□□ 0.41
Pcdhga4Q91XY4 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga4Q91XY4 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga4Q91XY4 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga4Q91XY4 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga4Q91XY4 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.63■□□□□ 0.41
Pcdhga4Q91XY4 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga4Q91XY4 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga4Q91XY4 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Pcdhga4Q91XY4 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga4Q91XY4 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Pcdhga4Q91XY4 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga4Q91XY4 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga4Q91XY4 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Pcdhga4Q91XY4 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhga4Q91XY4 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhga4Q91XY4 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhga4Q91XY4 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.62■□□□□ 0.41
Pcdhga4Q91XY4 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhga4Q91XY4 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhga4Q91XY4 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhga4Q91XY4 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Pcdhga4Q91XY4 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhga4Q91XY4 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhga4Q91XY4 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhga4Q91XY4 Gm8520-201ENSMUST00000186517 868 ntBASIC17.62■□□□□ 0.41
Pcdhga4Q91XY4 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhga4Q91XY4 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.62■□□□□ 0.41
Pcdhga4Q91XY4 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhga4Q91XY4 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhga4Q91XY4 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Pcdhga4Q91XY4 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Pcdhga4Q91XY4 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhga4Q91XY4 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhga4Q91XY4 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhga4Q91XY4 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Pcdhga4Q91XY4 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhga4Q91XY4 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhga4Q91XY4 Gm12527-201ENSMUST00000117967 564 ntBASIC17.61■□□□□ 0.41
Pcdhga4Q91XY4 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pcdhga4Q91XY4 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhga4Q91XY4 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhga4Q91XY4 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.61■□□□□ 0.41
Pcdhga4Q91XY4 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.61■□□□□ 0.41
Pcdhga4Q91XY4 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhga4Q91XY4 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhga4Q91XY4 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhga4Q91XY4 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhga4Q91XY4 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhga4Q91XY4 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhga4Q91XY4 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhga4Q91XY4 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
Pcdhga4Q91XY4 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhga4Q91XY4 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhga4Q91XY4 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhga4Q91XY4 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.6■□□□□ 0.41
Pcdhga4Q91XY4 Gm22325-201ENSMUST00000158904 308 ntBASIC17.6■□□□□ 0.41
Pcdhga4Q91XY4 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.6■□□□□ 0.41
Pcdhga4Q91XY4 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhga4Q91XY4 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Pcdhga4Q91XY4 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhga4Q91XY4 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhga4Q91XY4 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhga4Q91XY4 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhga4Q91XY4 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhga4Q91XY4 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhga4Q91XY4 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhga4Q91XY4 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhga4Q91XY4 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms