Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Gm45878-201ENSMUST00000211839 241 ntBASIC18.56■□□□□ 0.56
Pcdhb17Q91VD8 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.56■□□□□ 0.56
Pcdhb17Q91VD8 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Pcdhb17Q91VD8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb17Q91VD8 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb17Q91VD8 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
Pcdhb17Q91VD8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb17Q91VD8 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb17Q91VD8 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Pcdhb17Q91VD8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb17Q91VD8 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Pcdhb17Q91VD8 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb17Q91VD8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb17Q91VD8 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb17Q91VD8 Mir2861-201ENSMUST00000175539 82 ntBASIC18.55■□□□□ 0.56
Pcdhb17Q91VD8 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb17Q91VD8 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
Pcdhb17Q91VD8 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb17Q91VD8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb17Q91VD8 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.55■□□□□ 0.56
Pcdhb17Q91VD8 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb17Q91VD8 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb17Q91VD8 Gm44645-201ENSMUST00000205492 1653 ntBASIC18.54■□□□□ 0.56
Pcdhb17Q91VD8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb17Q91VD8 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb17Q91VD8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.54■□□□□ 0.56
Pcdhb17Q91VD8 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb17Q91VD8 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
Pcdhb17Q91VD8 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb17Q91VD8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb17Q91VD8 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb17Q91VD8 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb17Q91VD8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.53■□□□□ 0.56
Pcdhb17Q91VD8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb17Q91VD8 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb17Q91VD8 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb17Q91VD8 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.53■□□□□ 0.56
Pcdhb17Q91VD8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb17Q91VD8 Gm13168-201ENSMUST00000121771 632 ntBASIC18.53■□□□□ 0.56
Pcdhb17Q91VD8 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb17Q91VD8 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.53■□□□□ 0.56
Pcdhb17Q91VD8 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb17Q91VD8 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Pcdhb17Q91VD8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb17Q91VD8 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb17Q91VD8 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb17Q91VD8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Pcdhb17Q91VD8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb17Q91VD8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb17Q91VD8 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb17Q91VD8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb17Q91VD8 Gm15375-201ENSMUST00000119510 849 ntBASIC18.52■□□□□ 0.56
Pcdhb17Q91VD8 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb17Q91VD8 Mir6349-201ENSMUST00000184059 97 ntBASIC18.52■□□□□ 0.56
Pcdhb17Q91VD8 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.52■□□□□ 0.56
Pcdhb17Q91VD8 Gm43377-201ENSMUST00000201640 455 ntBASIC18.52■□□□□ 0.56
Pcdhb17Q91VD8 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb17Q91VD8 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb17Q91VD8 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb17Q91VD8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhb17Q91VD8 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Pcdhb17Q91VD8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb17Q91VD8 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb17Q91VD8 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb17Q91VD8 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb17Q91VD8 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb17Q91VD8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb17Q91VD8 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb17Q91VD8 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb17Q91VD8 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb17Q91VD8 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb17Q91VD8 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb17Q91VD8 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.5■□□□□ 0.55
Pcdhb17Q91VD8 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb17Q91VD8 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb17Q91VD8 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC18.5■□□□□ 0.55
Pcdhb17Q91VD8 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb17Q91VD8 Gm22240-201ENSMUST00000175225 82 ntBASIC18.5■□□□□ 0.55
Pcdhb17Q91VD8 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.5■□□□□ 0.55
Pcdhb17Q91VD8 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb17Q91VD8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.5■□□□□ 0.55
Pcdhb17Q91VD8 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb17Q91VD8 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb17Q91VD8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb17Q91VD8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb17Q91VD8 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.5■□□□□ 0.55
Pcdhb17Q91VD8 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb17Q91VD8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb17Q91VD8 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb17Q91VD8 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcdhb17Q91VD8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb17Q91VD8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb17Q91VD8 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhb17Q91VD8 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb17Q91VD8 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.49■□□□□ 0.55
Pcdhb17Q91VD8 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb17Q91VD8 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb17Q91VD8 Fst-202ENSMUST00000223640 2612 ntBASIC18.49■□□□□ 0.55
Pcdhb17Q91VD8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb17Q91VD8 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms