Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.58■□□□□ 0.56
Trim60Q8VI40 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Trim60Q8VI40 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim60Q8VI40 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.57■□□□□ 0.56
Trim60Q8VI40 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim60Q8VI40 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim60Q8VI40 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim60Q8VI40 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim60Q8VI40 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.57■□□□□ 0.56
Trim60Q8VI40 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.57■□□□□ 0.56
Trim60Q8VI40 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.57■□□□□ 0.56
Trim60Q8VI40 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim60Q8VI40 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim60Q8VI40 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim60Q8VI40 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim60Q8VI40 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim60Q8VI40 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim60Q8VI40 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trim60Q8VI40 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.56■□□□□ 0.56
Trim60Q8VI40 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim60Q8VI40 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim60Q8VI40 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Trim60Q8VI40 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim60Q8VI40 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim60Q8VI40 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
Trim60Q8VI40 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim60Q8VI40 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim60Q8VI40 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim60Q8VI40 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim60Q8VI40 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.55■□□□□ 0.56
Trim60Q8VI40 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim60Q8VI40 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim60Q8VI40 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim60Q8VI40 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim60Q8VI40 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim60Q8VI40 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim60Q8VI40 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.55■□□□□ 0.56
Trim60Q8VI40 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim60Q8VI40 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
Trim60Q8VI40 Gm6420-201ENSMUST00000193885 723 ntBASIC18.55■□□□□ 0.56
Trim60Q8VI40 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.55■□□□□ 0.56
Trim60Q8VI40 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.55■□□□□ 0.56
Trim60Q8VI40 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.55■□□□□ 0.56
Trim60Q8VI40 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.55■□□□□ 0.56
Trim60Q8VI40 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim60Q8VI40 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.55■□□□□ 0.56
Trim60Q8VI40 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim60Q8VI40 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim60Q8VI40 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Trim60Q8VI40 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Trim60Q8VI40 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Trim60Q8VI40 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim60Q8VI40 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim60Q8VI40 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim60Q8VI40 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
Trim60Q8VI40 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim60Q8VI40 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Trim60Q8VI40 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.54■□□□□ 0.56
Trim60Q8VI40 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Trim60Q8VI40 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim60Q8VI40 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim60Q8VI40 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim60Q8VI40 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.54■□□□□ 0.56
Trim60Q8VI40 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim60Q8VI40 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim60Q8VI40 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim60Q8VI40 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.53■□□□□ 0.56
Trim60Q8VI40 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Trim60Q8VI40 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim60Q8VI40 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim60Q8VI40 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.53■□□□□ 0.56
Trim60Q8VI40 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim60Q8VI40 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim60Q8VI40 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim60Q8VI40 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim60Q8VI40 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim60Q8VI40 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trim60Q8VI40 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trim60Q8VI40 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim60Q8VI40 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trim60Q8VI40 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.52■□□□□ 0.56
Trim60Q8VI40 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trim60Q8VI40 Nespas-201ENSMUST00000143738 1083 ntBASIC18.52■□□□□ 0.56
Trim60Q8VI40 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.52■□□□□ 0.56
Trim60Q8VI40 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim60Q8VI40 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim60Q8VI40 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim60Q8VI40 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
Trim60Q8VI40 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim60Q8VI40 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Trim60Q8VI40 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim60Q8VI40 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim60Q8VI40 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.51■□□□□ 0.55
Trim60Q8VI40 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim60Q8VI40 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Trim60Q8VI40 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim60Q8VI40 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim60Q8VI40 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Trim60Q8VI40 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim60Q8VI40 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms