Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cdhr1Q8VHP6 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdhr1Q8VHP6 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Cdhr1Q8VHP6 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Cdhr1Q8VHP6 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Cdhr1Q8VHP6 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Cdhr1Q8VHP6 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.49■□□□□ 0.39
Cdhr1Q8VHP6 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdhr1Q8VHP6 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Cdhr1Q8VHP6 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Cdhr1Q8VHP6 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Cdhr1Q8VHP6 Gm7977-201ENSMUST00000193787 748 ntBASIC17.49■□□□□ 0.39
Cdhr1Q8VHP6 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.49■□□□□ 0.39
Cdhr1Q8VHP6 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.49■□□□□ 0.39
Cdhr1Q8VHP6 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.49■□□□□ 0.39
Cdhr1Q8VHP6 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdhr1Q8VHP6 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cdhr1Q8VHP6 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdhr1Q8VHP6 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdhr1Q8VHP6 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdhr1Q8VHP6 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdhr1Q8VHP6 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdhr1Q8VHP6 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdhr1Q8VHP6 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdhr1Q8VHP6 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdhr1Q8VHP6 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdhr1Q8VHP6 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Cdhr1Q8VHP6 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.48■□□□□ 0.39
Cdhr1Q8VHP6 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdhr1Q8VHP6 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdhr1Q8VHP6 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cdhr1Q8VHP6 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.48■□□□□ 0.39
Cdhr1Q8VHP6 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdhr1Q8VHP6 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Cdhr1Q8VHP6 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdhr1Q8VHP6 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdhr1Q8VHP6 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cdhr1Q8VHP6 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdhr1Q8VHP6 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.48■□□□□ 0.39
Cdhr1Q8VHP6 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdhr1Q8VHP6 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
Cdhr1Q8VHP6 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cdhr1Q8VHP6 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Cdhr1Q8VHP6 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.47■□□□□ 0.39
Cdhr1Q8VHP6 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdhr1Q8VHP6 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdhr1Q8VHP6 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdhr1Q8VHP6 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Cdhr1Q8VHP6 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdhr1Q8VHP6 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Cdhr1Q8VHP6 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Cdhr1Q8VHP6 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.47■□□□□ 0.39
Cdhr1Q8VHP6 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Cdhr1Q8VHP6 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdhr1Q8VHP6 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdhr1Q8VHP6 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdhr1Q8VHP6 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
Cdhr1Q8VHP6 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Cdhr1Q8VHP6 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdhr1Q8VHP6 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Cdhr1Q8VHP6 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdhr1Q8VHP6 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.46■□□□□ 0.39
Cdhr1Q8VHP6 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdhr1Q8VHP6 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.46■□□□□ 0.39
Cdhr1Q8VHP6 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdhr1Q8VHP6 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdhr1Q8VHP6 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.46■□□□□ 0.39
Cdhr1Q8VHP6 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cdhr1Q8VHP6 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdhr1Q8VHP6 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cdhr1Q8VHP6 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdhr1Q8VHP6 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdhr1Q8VHP6 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.46■□□□□ 0.39
Cdhr1Q8VHP6 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdhr1Q8VHP6 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdhr1Q8VHP6 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Cdhr1Q8VHP6 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cdhr1Q8VHP6 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cdhr1Q8VHP6 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
Cdhr1Q8VHP6 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdhr1Q8VHP6 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdhr1Q8VHP6 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdhr1Q8VHP6 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdhr1Q8VHP6 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Cdhr1Q8VHP6 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Cdhr1Q8VHP6 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
Cdhr1Q8VHP6 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdhr1Q8VHP6 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Cdhr1Q8VHP6 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Cdhr1Q8VHP6 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdhr1Q8VHP6 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdhr1Q8VHP6 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cdhr1Q8VHP6 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdhr1Q8VHP6 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cdhr1Q8VHP6 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.45■□□□□ 0.38
Cdhr1Q8VHP6 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdhr1Q8VHP6 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.45■□□□□ 0.38
Cdhr1Q8VHP6 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdhr1Q8VHP6 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cdhr1Q8VHP6 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms