Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q8VDP2 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q8VDP2 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.49■□□□□ 0.39
Q8VDP2 Gm15039-201ENSMUST00000118914 875 ntBASIC17.49■□□□□ 0.39
Q8VDP2 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.49■□□□□ 0.39
Q8VDP2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.49■□□□□ 0.39
Q8VDP2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Q8VDP2 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q8VDP2 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q8VDP2 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q8VDP2 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.49■□□□□ 0.39
Q8VDP2 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Q8VDP2 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q8VDP2 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q8VDP2 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Q8VDP2 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q8VDP2 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q8VDP2 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Q8VDP2 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Q8VDP2 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q8VDP2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Q8VDP2 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Q8VDP2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q8VDP2 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.48■□□□□ 0.39
Q8VDP2 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
Q8VDP2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Q8VDP2 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q8VDP2 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Q8VDP2 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q8VDP2 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q8VDP2 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Q8VDP2 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q8VDP2 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q8VDP2 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q8VDP2 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q8VDP2 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Q8VDP2 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Q8VDP2 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q8VDP2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Q8VDP2 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Q8VDP2 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q8VDP2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.47■□□□□ 0.39
Q8VDP2 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q8VDP2 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Q8VDP2 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q8VDP2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q8VDP2 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q8VDP2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Q8VDP2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.47■□□□□ 0.39
Q8VDP2 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q8VDP2 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q8VDP2 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q8VDP2 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q8VDP2 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q8VDP2 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q8VDP2 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q8VDP2 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q8VDP2 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Q8VDP2 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Q8VDP2 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Q8VDP2 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q8VDP2 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Q8VDP2 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Q8VDP2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q8VDP2 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.47■□□□□ 0.39
Q8VDP2 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q8VDP2 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q8VDP2 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q8VDP2 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.46■□□□□ 0.39
Q8VDP2 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q8VDP2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q8VDP2 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q8VDP2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.46■□□□□ 0.39
Q8VDP2 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Q8VDP2 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q8VDP2 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Q8VDP2 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.46■□□□□ 0.39
Q8VDP2 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.46■□□□□ 0.39
Q8VDP2 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Q8VDP2 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q8VDP2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q8VDP2 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q8VDP2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q8VDP2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q8VDP2 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q8VDP2 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Q8VDP2 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Q8VDP2 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Q8VDP2 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Q8VDP2 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Q8VDP2 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q8VDP2 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q8VDP2 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q8VDP2 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q8VDP2 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Q8VDP2 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q8VDP2 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q8VDP2 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q8VDP2 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Q8VDP2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms