Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vmn1r28Q8R2C9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vmn1r28Q8R2C9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vmn1r28Q8R2C9 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vmn1r28Q8R2C9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vmn1r28Q8R2C9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Vmn1r28Q8R2C9 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vmn1r28Q8R2C9 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vmn1r28Q8R2C9 Gm13168-201ENSMUST00000121771 632 ntBASIC16.48■□□□□ 0.23
Vmn1r28Q8R2C9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vmn1r28Q8R2C9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vmn1r28Q8R2C9 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vmn1r28Q8R2C9 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vmn1r28Q8R2C9 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vmn1r28Q8R2C9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vmn1r28Q8R2C9 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vmn1r28Q8R2C9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vmn1r28Q8R2C9 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vmn1r28Q8R2C9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vmn1r28Q8R2C9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vmn1r28Q8R2C9 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vmn1r28Q8R2C9 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.47■□□□□ 0.23
Vmn1r28Q8R2C9 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Vmn1r28Q8R2C9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vmn1r28Q8R2C9 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.47■□□□□ 0.23
Vmn1r28Q8R2C9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Vmn1r28Q8R2C9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vmn1r28Q8R2C9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vmn1r28Q8R2C9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Vmn1r28Q8R2C9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vmn1r28Q8R2C9 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vmn1r28Q8R2C9 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.47■□□□□ 0.23
Vmn1r28Q8R2C9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vmn1r28Q8R2C9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vmn1r28Q8R2C9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Vmn1r28Q8R2C9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
Vmn1r28Q8R2C9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vmn1r28Q8R2C9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vmn1r28Q8R2C9 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vmn1r28Q8R2C9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Vmn1r28Q8R2C9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Vmn1r28Q8R2C9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vmn1r28Q8R2C9 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Vmn1r28Q8R2C9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Vmn1r28Q8R2C9 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.46■□□□□ 0.23
Vmn1r28Q8R2C9 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vmn1r28Q8R2C9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vmn1r28Q8R2C9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vmn1r28Q8R2C9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vmn1r28Q8R2C9 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.46■□□□□ 0.23
Vmn1r28Q8R2C9 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Vmn1r28Q8R2C9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Vmn1r28Q8R2C9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.45■□□□□ 0.22
Vmn1r28Q8R2C9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vmn1r28Q8R2C9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Vmn1r28Q8R2C9 Gm13158-201ENSMUST00000122007 736 ntBASIC16.45■□□□□ 0.22
Vmn1r28Q8R2C9 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vmn1r28Q8R2C9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vmn1r28Q8R2C9 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.45■□□□□ 0.22
Vmn1r28Q8R2C9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Vmn1r28Q8R2C9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vmn1r28Q8R2C9 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vmn1r28Q8R2C9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Vmn1r28Q8R2C9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
Vmn1r28Q8R2C9 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vmn1r28Q8R2C9 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Vmn1r28Q8R2C9 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.44■□□□□ 0.22
Vmn1r28Q8R2C9 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vmn1r28Q8R2C9 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.44■□□□□ 0.22
Vmn1r28Q8R2C9 Gm8520-201ENSMUST00000186517 868 ntBASIC16.44■□□□□ 0.22
Vmn1r28Q8R2C9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.44■□□□□ 0.22
Vmn1r28Q8R2C9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Vmn1r28Q8R2C9 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vmn1r28Q8R2C9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vmn1r28Q8R2C9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.44■□□□□ 0.22
Vmn1r28Q8R2C9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vmn1r28Q8R2C9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.43■□□□□ 0.22
Vmn1r28Q8R2C9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Vmn1r28Q8R2C9 Tgds-204ENSMUST00000228543 1594 ntBASIC16.43■□□□□ 0.22
Vmn1r28Q8R2C9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Vmn1r28Q8R2C9 Fst-202ENSMUST00000223640 2612 ntBASIC16.43■□□□□ 0.22
Vmn1r28Q8R2C9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vmn1r28Q8R2C9 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Vmn1r28Q8R2C9 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vmn1r28Q8R2C9 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Vmn1r28Q8R2C9 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vmn1r28Q8R2C9 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Vmn1r28Q8R2C9 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.43■□□□□ 0.22
Vmn1r28Q8R2C9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vmn1r28Q8R2C9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vmn1r28Q8R2C9 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vmn1r28Q8R2C9 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vmn1r28Q8R2C9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vmn1r28Q8R2C9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vmn1r28Q8R2C9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vmn1r28Q8R2C9 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Vmn1r28Q8R2C9 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Vmn1r28Q8R2C9 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Vmn1r28Q8R2C9 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vmn1r28Q8R2C9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms