Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.97■□□□□ 0.47
Nudcd3Q8R1N4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nudcd3Q8R1N4 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nudcd3Q8R1N4 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Nudcd3Q8R1N4 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nudcd3Q8R1N4 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nudcd3Q8R1N4 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Nudcd3Q8R1N4 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nudcd3Q8R1N4 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nudcd3Q8R1N4 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Nudcd3Q8R1N4 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nudcd3Q8R1N4 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nudcd3Q8R1N4 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nudcd3Q8R1N4 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.96■□□□□ 0.47
Nudcd3Q8R1N4 Gm26833-201ENSMUST00000180899 440 ntBASIC17.96■□□□□ 0.47
Nudcd3Q8R1N4 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nudcd3Q8R1N4 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nudcd3Q8R1N4 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Nudcd3Q8R1N4 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nudcd3Q8R1N4 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nudcd3Q8R1N4 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nudcd3Q8R1N4 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Nudcd3Q8R1N4 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nudcd3Q8R1N4 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nudcd3Q8R1N4 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nudcd3Q8R1N4 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Nudcd3Q8R1N4 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nudcd3Q8R1N4 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Nudcd3Q8R1N4 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nudcd3Q8R1N4 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.95■□□□□ 0.46
Nudcd3Q8R1N4 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nudcd3Q8R1N4 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nudcd3Q8R1N4 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nudcd3Q8R1N4 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
Nudcd3Q8R1N4 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.95■□□□□ 0.46
Nudcd3Q8R1N4 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.95■□□□□ 0.46
Nudcd3Q8R1N4 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nudcd3Q8R1N4 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nudcd3Q8R1N4 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nudcd3Q8R1N4 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nudcd3Q8R1N4 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Nudcd3Q8R1N4 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nudcd3Q8R1N4 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.95■□□□□ 0.46
Nudcd3Q8R1N4 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nudcd3Q8R1N4 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Nudcd3Q8R1N4 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nudcd3Q8R1N4 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nudcd3Q8R1N4 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nudcd3Q8R1N4 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nudcd3Q8R1N4 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nudcd3Q8R1N4 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nudcd3Q8R1N4 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.94■□□□□ 0.46
Nudcd3Q8R1N4 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nudcd3Q8R1N4 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Nudcd3Q8R1N4 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nudcd3Q8R1N4 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Nudcd3Q8R1N4 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.94■□□□□ 0.46
Nudcd3Q8R1N4 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.94■□□□□ 0.46
Nudcd3Q8R1N4 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nudcd3Q8R1N4 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nudcd3Q8R1N4 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nudcd3Q8R1N4 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Nudcd3Q8R1N4 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nudcd3Q8R1N4 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nudcd3Q8R1N4 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nudcd3Q8R1N4 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nudcd3Q8R1N4 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nudcd3Q8R1N4 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nudcd3Q8R1N4 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nudcd3Q8R1N4 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Nudcd3Q8R1N4 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nudcd3Q8R1N4 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nudcd3Q8R1N4 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nudcd3Q8R1N4 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nudcd3Q8R1N4 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nudcd3Q8R1N4 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Nudcd3Q8R1N4 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.93■□□□□ 0.46
Nudcd3Q8R1N4 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nudcd3Q8R1N4 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nudcd3Q8R1N4 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Nudcd3Q8R1N4 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Nudcd3Q8R1N4 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nudcd3Q8R1N4 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nudcd3Q8R1N4 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Nudcd3Q8R1N4 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nudcd3Q8R1N4 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nudcd3Q8R1N4 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nudcd3Q8R1N4 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Nudcd3Q8R1N4 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Nudcd3Q8R1N4 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Nudcd3Q8R1N4 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nudcd3Q8R1N4 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nudcd3Q8R1N4 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nudcd3Q8R1N4 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nudcd3Q8R1N4 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nudcd3Q8R1N4 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nudcd3Q8R1N4 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nudcd3Q8R1N4 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nudcd3Q8R1N4 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nudcd3Q8R1N4 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms