Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Zcchc9Q8R1J3 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Zcchc9Q8R1J3 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Zcchc9Q8R1J3 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Zcchc9Q8R1J3 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Zcchc9Q8R1J3 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Zcchc9Q8R1J3 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
Zcchc9Q8R1J3 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.87■□□□□ 0.45
Zcchc9Q8R1J3 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zcchc9Q8R1J3 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zcchc9Q8R1J3 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zcchc9Q8R1J3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zcchc9Q8R1J3 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zcchc9Q8R1J3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zcchc9Q8R1J3 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.87■□□□□ 0.45
Zcchc9Q8R1J3 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Zcchc9Q8R1J3 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zcchc9Q8R1J3 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zcchc9Q8R1J3 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Zcchc9Q8R1J3 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Zcchc9Q8R1J3 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Zcchc9Q8R1J3 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.86■□□□□ 0.45
Zcchc9Q8R1J3 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Zcchc9Q8R1J3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Zcchc9Q8R1J3 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Zcchc9Q8R1J3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Zcchc9Q8R1J3 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Zcchc9Q8R1J3 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Zcchc9Q8R1J3 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Zcchc9Q8R1J3 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Zcchc9Q8R1J3 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.85■□□□□ 0.45
Zcchc9Q8R1J3 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Zcchc9Q8R1J3 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.85■□□□□ 0.45
Zcchc9Q8R1J3 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Zcchc9Q8R1J3 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Zcchc9Q8R1J3 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Zcchc9Q8R1J3 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Zcchc9Q8R1J3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Zcchc9Q8R1J3 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Zcchc9Q8R1J3 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Zcchc9Q8R1J3 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Zcchc9Q8R1J3 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Zcchc9Q8R1J3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Zcchc9Q8R1J3 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Zcchc9Q8R1J3 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Zcchc9Q8R1J3 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Zcchc9Q8R1J3 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Zcchc9Q8R1J3 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Zcchc9Q8R1J3 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Zcchc9Q8R1J3 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Zcchc9Q8R1J3 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.84■□□□□ 0.45
Zcchc9Q8R1J3 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.84■□□□□ 0.45
Zcchc9Q8R1J3 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Zcchc9Q8R1J3 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Zcchc9Q8R1J3 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.84■□□□□ 0.45
Zcchc9Q8R1J3 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Zcchc9Q8R1J3 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Zcchc9Q8R1J3 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.83■□□□□ 0.45
Zcchc9Q8R1J3 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Zcchc9Q8R1J3 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Zcchc9Q8R1J3 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Zcchc9Q8R1J3 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Zcchc9Q8R1J3 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Zcchc9Q8R1J3 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.83■□□□□ 0.44
Zcchc9Q8R1J3 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Zcchc9Q8R1J3 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Zcchc9Q8R1J3 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Zcchc9Q8R1J3 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Zcchc9Q8R1J3 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Zcchc9Q8R1J3 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Zcchc9Q8R1J3 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
Zcchc9Q8R1J3 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Zcchc9Q8R1J3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Zcchc9Q8R1J3 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Zcchc9Q8R1J3 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Zcchc9Q8R1J3 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.83■□□□□ 0.44
Zcchc9Q8R1J3 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Zcchc9Q8R1J3 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Zcchc9Q8R1J3 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Zcchc9Q8R1J3 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Zcchc9Q8R1J3 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Zcchc9Q8R1J3 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Zcchc9Q8R1J3 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.82■□□□□ 0.44
Zcchc9Q8R1J3 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.82■□□□□ 0.44
Zcchc9Q8R1J3 Gm43799-201ENSMUST00000201845 579 ntBASIC17.82■□□□□ 0.44
Zcchc9Q8R1J3 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.82■□□□□ 0.44
Zcchc9Q8R1J3 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.82■□□□□ 0.44
Zcchc9Q8R1J3 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Zcchc9Q8R1J3 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Zcchc9Q8R1J3 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Zcchc9Q8R1J3 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Zcchc9Q8R1J3 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Zcchc9Q8R1J3 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Zcchc9Q8R1J3 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Zcchc9Q8R1J3 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Zcchc9Q8R1J3 Gm43183-201ENSMUST00000200632 547 ntBASIC17.81■□□□□ 0.44
Zcchc9Q8R1J3 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.81■□□□□ 0.44
Zcchc9Q8R1J3 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Zcchc9Q8R1J3 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.81■□□□□ 0.44
Zcchc9Q8R1J3 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms