Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rpp40Q8R1F9 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Rpp40Q8R1F9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpp40Q8R1F9 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpp40Q8R1F9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Rpp40Q8R1F9 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpp40Q8R1F9 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpp40Q8R1F9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpp40Q8R1F9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Rpp40Q8R1F9 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.2■□□□□ 0.66
Rpp40Q8R1F9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpp40Q8R1F9 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpp40Q8R1F9 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.2■□□□□ 0.66
Rpp40Q8R1F9 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpp40Q8R1F9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.19■□□□□ 0.66
Rpp40Q8R1F9 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpp40Q8R1F9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpp40Q8R1F9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpp40Q8R1F9 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpp40Q8R1F9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpp40Q8R1F9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpp40Q8R1F9 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpp40Q8R1F9 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpp40Q8R1F9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpp40Q8R1F9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpp40Q8R1F9 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Rpp40Q8R1F9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpp40Q8R1F9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpp40Q8R1F9 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpp40Q8R1F9 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpp40Q8R1F9 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rpp40Q8R1F9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.18■□□□□ 0.66
Rpp40Q8R1F9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpp40Q8R1F9 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Rpp40Q8R1F9 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Rpp40Q8R1F9 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpp40Q8R1F9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Rpp40Q8R1F9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpp40Q8R1F9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpp40Q8R1F9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.18■□□□□ 0.66
Rpp40Q8R1F9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpp40Q8R1F9 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rpp40Q8R1F9 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpp40Q8R1F9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.18■□□□□ 0.66
Rpp40Q8R1F9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.18■□□□□ 0.66
Rpp40Q8R1F9 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.18■□□□□ 0.66
Rpp40Q8R1F9 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpp40Q8R1F9 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpp40Q8R1F9 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rpp40Q8R1F9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rpp40Q8R1F9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Rpp40Q8R1F9 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rpp40Q8R1F9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpp40Q8R1F9 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpp40Q8R1F9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Rpp40Q8R1F9 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpp40Q8R1F9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpp40Q8R1F9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.17■□□□□ 0.66
Rpp40Q8R1F9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpp40Q8R1F9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpp40Q8R1F9 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Rpp40Q8R1F9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rpp40Q8R1F9 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rpp40Q8R1F9 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Rpp40Q8R1F9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Rpp40Q8R1F9 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rpp40Q8R1F9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpp40Q8R1F9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpp40Q8R1F9 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpp40Q8R1F9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpp40Q8R1F9 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.16■□□□□ 0.66
Rpp40Q8R1F9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpp40Q8R1F9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Rpp40Q8R1F9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rpp40Q8R1F9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpp40Q8R1F9 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Rpp40Q8R1F9 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpp40Q8R1F9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rpp40Q8R1F9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.16■□□□□ 0.66
Rpp40Q8R1F9 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.16■□□□□ 0.66
Rpp40Q8R1F9 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpp40Q8R1F9 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpp40Q8R1F9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rpp40Q8R1F9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpp40Q8R1F9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpp40Q8R1F9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Rpp40Q8R1F9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpp40Q8R1F9 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpp40Q8R1F9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rpp40Q8R1F9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.16■□□□□ 0.66
Rpp40Q8R1F9 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rpp40Q8R1F9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpp40Q8R1F9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rpp40Q8R1F9 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rpp40Q8R1F9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Rpp40Q8R1F9 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.15■□□□□ 0.66
Rpp40Q8R1F9 Mir1199-201ENSMUST00000117015 119 ntBASIC19.15■□□□□ 0.66
Rpp40Q8R1F9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Rpp40Q8R1F9 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.15■□□□□ 0.66
Rpp40Q8R1F9 Gm10252-201ENSMUST00000209541 832 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms