Protein–RNA interactions for Protein: Q8R0W1

Cipc, CLOCK-interacting pacemaker, mousemouse

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CipcQ8R0W1 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CipcQ8R0W1 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CipcQ8R0W1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CipcQ8R0W1 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CipcQ8R0W1 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CipcQ8R0W1 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CipcQ8R0W1 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
CipcQ8R0W1 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CipcQ8R0W1 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
CipcQ8R0W1 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CipcQ8R0W1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CipcQ8R0W1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CipcQ8R0W1 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.95■□□□□ 0.3
CipcQ8R0W1 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.95■□□□□ 0.3
CipcQ8R0W1 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CipcQ8R0W1 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CipcQ8R0W1 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CipcQ8R0W1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CipcQ8R0W1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CipcQ8R0W1 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CipcQ8R0W1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CipcQ8R0W1 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CipcQ8R0W1 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.94■□□□□ 0.3
CipcQ8R0W1 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.94■□□□□ 0.3
CipcQ8R0W1 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.94■□□□□ 0.3
CipcQ8R0W1 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CipcQ8R0W1 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CipcQ8R0W1 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CipcQ8R0W1 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CipcQ8R0W1 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CipcQ8R0W1 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CipcQ8R0W1 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CipcQ8R0W1 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CipcQ8R0W1 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CipcQ8R0W1 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CipcQ8R0W1 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CipcQ8R0W1 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CipcQ8R0W1 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CipcQ8R0W1 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.93■□□□□ 0.3
CipcQ8R0W1 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CipcQ8R0W1 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CipcQ8R0W1 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CipcQ8R0W1 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CipcQ8R0W1 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CipcQ8R0W1 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CipcQ8R0W1 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CipcQ8R0W1 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CipcQ8R0W1 Grk6-206ENSMUST00000224995 2971 ntBASIC16.93■□□□□ 0.3
CipcQ8R0W1 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CipcQ8R0W1 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CipcQ8R0W1 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CipcQ8R0W1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CipcQ8R0W1 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.93■□□□□ 0.3
CipcQ8R0W1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CipcQ8R0W1 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.92■□□□□ 0.3
CipcQ8R0W1 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.92■□□□□ 0.3
CipcQ8R0W1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CipcQ8R0W1 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.92■□□□□ 0.3
CipcQ8R0W1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.92■□□□□ 0.3
CipcQ8R0W1 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.92■□□□□ 0.3
CipcQ8R0W1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CipcQ8R0W1 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CipcQ8R0W1 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.92■□□□□ 0.3
CipcQ8R0W1 Dio3-201ENSMUST00000097228 1449 ntBASIC16.92■□□□□ 0.3
CipcQ8R0W1 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CipcQ8R0W1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CipcQ8R0W1 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CipcQ8R0W1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CipcQ8R0W1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CipcQ8R0W1 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CipcQ8R0W1 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CipcQ8R0W1 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CipcQ8R0W1 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CipcQ8R0W1 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CipcQ8R0W1 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.91■□□□□ 0.3
CipcQ8R0W1 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.91■□□□□ 0.3
CipcQ8R0W1 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CipcQ8R0W1 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CipcQ8R0W1 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CipcQ8R0W1 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CipcQ8R0W1 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CipcQ8R0W1 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CipcQ8R0W1 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CipcQ8R0W1 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.91■□□□□ 0.3
CipcQ8R0W1 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CipcQ8R0W1 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CipcQ8R0W1 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CipcQ8R0W1 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CipcQ8R0W1 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.91■□□□□ 0.3
CipcQ8R0W1 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CipcQ8R0W1 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CipcQ8R0W1 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CipcQ8R0W1 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CipcQ8R0W1 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CipcQ8R0W1 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CipcQ8R0W1 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.9■□□□□ 0.3
CipcQ8R0W1 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CipcQ8R0W1 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CipcQ8R0W1 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CipcQ8R0W1 Gm22325-201ENSMUST00000158904 308 ntBASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms