Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Atf7Q8R0S1 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Atf7Q8R0S1 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Atf7Q8R0S1 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Atf7Q8R0S1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Atf7Q8R0S1 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Atf7Q8R0S1 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Atf7Q8R0S1 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC21.18■□□□□ 0.98
Atf7Q8R0S1 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Atf7Q8R0S1 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Atf7Q8R0S1 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Atf7Q8R0S1 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Atf7Q8R0S1 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Atf7Q8R0S1 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Atf7Q8R0S1 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC21.18■□□□□ 0.98
Atf7Q8R0S1 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Atf7Q8R0S1 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Atf7Q8R0S1 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
Atf7Q8R0S1 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atf7Q8R0S1 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atf7Q8R0S1 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atf7Q8R0S1 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC21.17■□□□□ 0.98
Atf7Q8R0S1 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atf7Q8R0S1 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atf7Q8R0S1 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atf7Q8R0S1 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atf7Q8R0S1 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atf7Q8R0S1 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atf7Q8R0S1 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atf7Q8R0S1 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Atf7Q8R0S1 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atf7Q8R0S1 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atf7Q8R0S1 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atf7Q8R0S1 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Atf7Q8R0S1 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Atf7Q8R0S1 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atf7Q8R0S1 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atf7Q8R0S1 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
Atf7Q8R0S1 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Atf7Q8R0S1 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atf7Q8R0S1 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atf7Q8R0S1 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Atf7Q8R0S1 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atf7Q8R0S1 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atf7Q8R0S1 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atf7Q8R0S1 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atf7Q8R0S1 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atf7Q8R0S1 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atf7Q8R0S1 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atf7Q8R0S1 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atf7Q8R0S1 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Atf7Q8R0S1 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atf7Q8R0S1 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atf7Q8R0S1 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Atf7Q8R0S1 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC21.15■□□□□ 0.98
Atf7Q8R0S1 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Atf7Q8R0S1 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC21.15■□□□□ 0.98
Atf7Q8R0S1 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC21.15■□□□□ 0.98
Atf7Q8R0S1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atf7Q8R0S1 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atf7Q8R0S1 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atf7Q8R0S1 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atf7Q8R0S1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Atf7Q8R0S1 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC21.14■□□□□ 0.98
Atf7Q8R0S1 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Atf7Q8R0S1 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Atf7Q8R0S1 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Atf7Q8R0S1 Gm11927-201ENSMUST00000118472 759 ntBASIC21.14■□□□□ 0.97
Atf7Q8R0S1 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Atf7Q8R0S1 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Atf7Q8R0S1 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC21.14■□□□□ 0.97
Atf7Q8R0S1 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Atf7Q8R0S1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Atf7Q8R0S1 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Atf7Q8R0S1 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Atf7Q8R0S1 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Atf7Q8R0S1 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Atf7Q8R0S1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Atf7Q8R0S1 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Atf7Q8R0S1 Idnk-204ENSMUST00000226010 1898 ntBASIC21.13■□□□□ 0.97
Atf7Q8R0S1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Atf7Q8R0S1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Atf7Q8R0S1 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Atf7Q8R0S1 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Atf7Q8R0S1 Gm15847-201ENSMUST00000121417 1065 ntBASIC21.13■□□□□ 0.97
Atf7Q8R0S1 Gm4968-201ENSMUST00000071458 858 ntBASIC21.13■□□□□ 0.97
Atf7Q8R0S1 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Atf7Q8R0S1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Atf7Q8R0S1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Atf7Q8R0S1 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC21.13■□□□□ 0.97
Atf7Q8R0S1 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Atf7Q8R0S1 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atf7Q8R0S1 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atf7Q8R0S1 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Atf7Q8R0S1 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Atf7Q8R0S1 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Atf7Q8R0S1 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atf7Q8R0S1 Gm45606-201ENSMUST00000209836 2795 ntBASIC21.12■□□□□ 0.97
Atf7Q8R0S1 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atf7Q8R0S1 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms