Protein–RNA interactions for Protein: Q8CIR4

Trpm6, Transient receptor potential cation channel subfamily M member 6, mousemouse

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm6Q8CIR4 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trpm6Q8CIR4 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trpm6Q8CIR4 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.04■□□□□ 0.48
Trpm6Q8CIR4 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trpm6Q8CIR4 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trpm6Q8CIR4 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trpm6Q8CIR4 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trpm6Q8CIR4 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trpm6Q8CIR4 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trpm6Q8CIR4 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trpm6Q8CIR4 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trpm6Q8CIR4 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Trpm6Q8CIR4 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trpm6Q8CIR4 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trpm6Q8CIR4 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trpm6Q8CIR4 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trpm6Q8CIR4 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trpm6Q8CIR4 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.03■□□□□ 0.48
Trpm6Q8CIR4 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trpm6Q8CIR4 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trpm6Q8CIR4 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trpm6Q8CIR4 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trpm6Q8CIR4 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trpm6Q8CIR4 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trpm6Q8CIR4 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trpm6Q8CIR4 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.02■□□□□ 0.48
Trpm6Q8CIR4 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trpm6Q8CIR4 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trpm6Q8CIR4 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.02■□□□□ 0.47
Trpm6Q8CIR4 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trpm6Q8CIR4 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trpm6Q8CIR4 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trpm6Q8CIR4 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Trpm6Q8CIR4 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.01■□□□□ 0.47
Trpm6Q8CIR4 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.01■□□□□ 0.47
Trpm6Q8CIR4 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Trpm6Q8CIR4 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
Trpm6Q8CIR4 Gm10517-202ENSMUST00000192970 758 ntBASIC18.01■□□□□ 0.47
Trpm6Q8CIR4 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trpm6Q8CIR4 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trpm6Q8CIR4 Gm45906-201ENSMUST00000208911 1430 ntBASIC18■□□□□ 0.47
Trpm6Q8CIR4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trpm6Q8CIR4 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trpm6Q8CIR4 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trpm6Q8CIR4 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trpm6Q8CIR4 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trpm6Q8CIR4 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18■□□□□ 0.47
Trpm6Q8CIR4 Gm43353-201ENSMUST00000199224 1295 ntBASIC18■□□□□ 0.47
Trpm6Q8CIR4 Gm18032-201ENSMUST00000222541 538 ntBASIC18■□□□□ 0.47
Trpm6Q8CIR4 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trpm6Q8CIR4 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trpm6Q8CIR4 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trpm6Q8CIR4 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trpm6Q8CIR4 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trpm6Q8CIR4 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Trpm6Q8CIR4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trpm6Q8CIR4 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trpm6Q8CIR4 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trpm6Q8CIR4 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trpm6Q8CIR4 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
Trpm6Q8CIR4 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trpm6Q8CIR4 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Trpm6Q8CIR4 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trpm6Q8CIR4 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trpm6Q8CIR4 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trpm6Q8CIR4 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trpm6Q8CIR4 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trpm6Q8CIR4 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trpm6Q8CIR4 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Trpm6Q8CIR4 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trpm6Q8CIR4 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trpm6Q8CIR4 Gm27463-201ENSMUST00000183569 57 ntBASIC17.98■□□□□ 0.47
Trpm6Q8CIR4 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
Trpm6Q8CIR4 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trpm6Q8CIR4 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
Trpm6Q8CIR4 Tgds-204ENSMUST00000228543 1594 ntBASIC17.98■□□□□ 0.47
Trpm6Q8CIR4 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trpm6Q8CIR4 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trpm6Q8CIR4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trpm6Q8CIR4 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trpm6Q8CIR4 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Trpm6Q8CIR4 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.98■□□□□ 0.47
Trpm6Q8CIR4 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trpm6Q8CIR4 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trpm6Q8CIR4 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trpm6Q8CIR4 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trpm6Q8CIR4 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trpm6Q8CIR4 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trpm6Q8CIR4 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trpm6Q8CIR4 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trpm6Q8CIR4 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trpm6Q8CIR4 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.97■□□□□ 0.47
Trpm6Q8CIR4 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trpm6Q8CIR4 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.97■□□□□ 0.47
Trpm6Q8CIR4 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trpm6Q8CIR4 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trpm6Q8CIR4 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.97■□□□□ 0.47
Trpm6Q8CIR4 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trpm6Q8CIR4 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trpm6Q8CIR4 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms