Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Rab11fip3Q8CHD8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Rab11fip3Q8CHD8 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Rab11fip3Q8CHD8 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC23.24■■□□□ 1.31
Rab11fip3Q8CHD8 Gm29994-201ENSMUST00000195495 1193 ntBASIC23.24■■□□□ 1.31
Rab11fip3Q8CHD8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Rab11fip3Q8CHD8 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rab11fip3Q8CHD8 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Rab11fip3Q8CHD8 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rab11fip3Q8CHD8 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rab11fip3Q8CHD8 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Rab11fip3Q8CHD8 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC23.24■■□□□ 1.31
Rab11fip3Q8CHD8 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rab11fip3Q8CHD8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC23.23■■□□□ 1.31
Rab11fip3Q8CHD8 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC23.23■■□□□ 1.31
Rab11fip3Q8CHD8 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Rab11fip3Q8CHD8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
Rab11fip3Q8CHD8 Gm3375-201ENSMUST00000203929 796 ntBASIC23.23■■□□□ 1.31
Rab11fip3Q8CHD8 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rab11fip3Q8CHD8 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rab11fip3Q8CHD8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rab11fip3Q8CHD8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rab11fip3Q8CHD8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rab11fip3Q8CHD8 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rab11fip3Q8CHD8 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rab11fip3Q8CHD8 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC23.22■■□□□ 1.31
Rab11fip3Q8CHD8 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Rab11fip3Q8CHD8 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Rab11fip3Q8CHD8 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Rab11fip3Q8CHD8 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Rab11fip3Q8CHD8 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rab11fip3Q8CHD8 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rab11fip3Q8CHD8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rab11fip3Q8CHD8 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Rab11fip3Q8CHD8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rab11fip3Q8CHD8 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rab11fip3Q8CHD8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rab11fip3Q8CHD8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rab11fip3Q8CHD8 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Rab11fip3Q8CHD8 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC23.21■■□□□ 1.31
Rab11fip3Q8CHD8 Gm30025-201ENSMUST00000218555 728 ntBASIC23.21■■□□□ 1.31
Rab11fip3Q8CHD8 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rab11fip3Q8CHD8 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Rab11fip3Q8CHD8 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rab11fip3Q8CHD8 Gm6627-201ENSMUST00000218299 2386 ntBASIC23.21■■□□□ 1.31
Rab11fip3Q8CHD8 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rab11fip3Q8CHD8 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rab11fip3Q8CHD8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
Rab11fip3Q8CHD8 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rab11fip3Q8CHD8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rab11fip3Q8CHD8 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rab11fip3Q8CHD8 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rab11fip3Q8CHD8 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Rab11fip3Q8CHD8 Gm6433-201ENSMUST00000118634 875 ntBASIC23.2■■□□□ 1.3
Rab11fip3Q8CHD8 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rab11fip3Q8CHD8 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC23.2■■□□□ 1.3
Rab11fip3Q8CHD8 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rab11fip3Q8CHD8 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Rab11fip3Q8CHD8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Rab11fip3Q8CHD8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Rab11fip3Q8CHD8 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rab11fip3Q8CHD8 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rab11fip3Q8CHD8 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rab11fip3Q8CHD8 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rab11fip3Q8CHD8 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rab11fip3Q8CHD8 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Rab11fip3Q8CHD8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Rab11fip3Q8CHD8 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rab11fip3Q8CHD8 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Rab11fip3Q8CHD8 Gm10517-202ENSMUST00000192970 758 ntBASIC23.19■■□□□ 1.3
Rab11fip3Q8CHD8 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Rab11fip3Q8CHD8 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rab11fip3Q8CHD8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rab11fip3Q8CHD8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rab11fip3Q8CHD8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Rab11fip3Q8CHD8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rab11fip3Q8CHD8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rab11fip3Q8CHD8 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
Rab11fip3Q8CHD8 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rab11fip3Q8CHD8 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC23.18■■□□□ 1.3
Rab11fip3Q8CHD8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC23.18■■□□□ 1.3
Rab11fip3Q8CHD8 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC23.18■■□□□ 1.3
Rab11fip3Q8CHD8 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rab11fip3Q8CHD8 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Rab11fip3Q8CHD8 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
Rab11fip3Q8CHD8 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Rab11fip3Q8CHD8 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC23.17■■□□□ 1.3
Rab11fip3Q8CHD8 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC23.17■■□□□ 1.3
Rab11fip3Q8CHD8 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Rab11fip3Q8CHD8 Gm43799-201ENSMUST00000201845 579 ntBASIC23.17■■□□□ 1.3
Rab11fip3Q8CHD8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC23.17■■□□□ 1.3
Rab11fip3Q8CHD8 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rab11fip3Q8CHD8 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rab11fip3Q8CHD8 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rab11fip3Q8CHD8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC23.17■■□□□ 1.3
Rab11fip3Q8CHD8 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC23.17■■□□□ 1.3
Rab11fip3Q8CHD8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rab11fip3Q8CHD8 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rab11fip3Q8CHD8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rab11fip3Q8CHD8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms