Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Smc5Q8CG46 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC22.22■■□□□ 1.15
Smc5Q8CG46 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Smc5Q8CG46 Gm10033-202ENSMUST00000211874 928 ntBASIC22.22■■□□□ 1.15
Smc5Q8CG46 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Smc5Q8CG46 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC22.22■■□□□ 1.15
Smc5Q8CG46 Gm7292-201ENSMUST00000194706 2527 ntBASIC22.22■■□□□ 1.15
Smc5Q8CG46 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Smc5Q8CG46 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Smc5Q8CG46 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Smc5Q8CG46 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Smc5Q8CG46 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Smc5Q8CG46 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Smc5Q8CG46 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC22.21■■□□□ 1.15
Smc5Q8CG46 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC22.21■■□□□ 1.15
Smc5Q8CG46 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Smc5Q8CG46 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Smc5Q8CG46 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Smc5Q8CG46 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Smc5Q8CG46 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC22.21■■□□□ 1.15
Smc5Q8CG46 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Smc5Q8CG46 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Smc5Q8CG46 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Smc5Q8CG46 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.15
Smc5Q8CG46 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC22.2■■□□□ 1.14
Smc5Q8CG46 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Smc5Q8CG46 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Smc5Q8CG46 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC22.2■■□□□ 1.14
Smc5Q8CG46 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
Smc5Q8CG46 AC099934.2-201ENSMUST00000196389 70 ntBASIC22.2■■□□□ 1.14
Smc5Q8CG46 AC156953.1-201ENSMUST00000196953 70 ntBASIC22.2■■□□□ 1.14
Smc5Q8CG46 Gm42778-201ENSMUST00000199644 553 ntBASIC22.2■■□□□ 1.14
Smc5Q8CG46 AC157822.2-201ENSMUST00000200291 70 ntBASIC22.2■■□□□ 1.14
Smc5Q8CG46 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Smc5Q8CG46 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Smc5Q8CG46 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Smc5Q8CG46 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Smc5Q8CG46 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Smc5Q8CG46 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Smc5Q8CG46 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Smc5Q8CG46 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Smc5Q8CG46 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Smc5Q8CG46 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC22.19■■□□□ 1.14
Smc5Q8CG46 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Smc5Q8CG46 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Smc5Q8CG46 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Smc5Q8CG46 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Smc5Q8CG46 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Smc5Q8CG46 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Smc5Q8CG46 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Smc5Q8CG46 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Smc5Q8CG46 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Smc5Q8CG46 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Smc5Q8CG46 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Smc5Q8CG46 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Smc5Q8CG46 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC22.18■■□□□ 1.14
Smc5Q8CG46 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Smc5Q8CG46 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Smc5Q8CG46 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Smc5Q8CG46 Gm7514-201ENSMUST00000209475 934 ntBASIC22.18■■□□□ 1.14
Smc5Q8CG46 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Smc5Q8CG46 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Smc5Q8CG46 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Smc5Q8CG46 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Smc5Q8CG46 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Smc5Q8CG46 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Smc5Q8CG46 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Smc5Q8CG46 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Smc5Q8CG46 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Smc5Q8CG46 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
Smc5Q8CG46 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Smc5Q8CG46 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Smc5Q8CG46 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Smc5Q8CG46 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Smc5Q8CG46 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Smc5Q8CG46 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Smc5Q8CG46 Dapk1-207ENSMUST00000226059 5009 ntBASIC22.16■■□□□ 1.14
Smc5Q8CG46 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Smc5Q8CG46 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC22.16■■□□□ 1.14
Smc5Q8CG46 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Smc5Q8CG46 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Smc5Q8CG46 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Smc5Q8CG46 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Smc5Q8CG46 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Smc5Q8CG46 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Smc5Q8CG46 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC22.16■■□□□ 1.14
Smc5Q8CG46 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC22.16■■□□□ 1.14
Smc5Q8CG46 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Smc5Q8CG46 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC22.16■■□□□ 1.14
Smc5Q8CG46 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Smc5Q8CG46 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Smc5Q8CG46 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Smc5Q8CG46 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Smc5Q8CG46 Gm45244-201ENSMUST00000211328 2200 ntBASIC22.16■■□□□ 1.14
Smc5Q8CG46 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
Smc5Q8CG46 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Smc5Q8CG46 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Smc5Q8CG46 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Smc5Q8CG46 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Smc5Q8CG46 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms