Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc28aQ8CEI3 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc28aQ8CEI3 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc28aQ8CEI3 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc28aQ8CEI3 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
Ccdc28aQ8CEI3 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc28aQ8CEI3 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.95■□□□□ 0.62
Ccdc28aQ8CEI3 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc28aQ8CEI3 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc28aQ8CEI3 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc28aQ8CEI3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc28aQ8CEI3 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc28aQ8CEI3 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc28aQ8CEI3 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc28aQ8CEI3 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Ccdc28aQ8CEI3 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc28aQ8CEI3 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc28aQ8CEI3 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc28aQ8CEI3 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc28aQ8CEI3 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc28aQ8CEI3 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc28aQ8CEI3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc28aQ8CEI3 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc28aQ8CEI3 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
Ccdc28aQ8CEI3 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc28aQ8CEI3 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc28aQ8CEI3 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc28aQ8CEI3 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc28aQ8CEI3 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc28aQ8CEI3 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Ccdc28aQ8CEI3 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc28aQ8CEI3 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc28aQ8CEI3 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc28aQ8CEI3 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc28aQ8CEI3 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc28aQ8CEI3 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc28aQ8CEI3 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc28aQ8CEI3 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc28aQ8CEI3 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc28aQ8CEI3 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc28aQ8CEI3 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc28aQ8CEI3 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.92■□□□□ 0.62
Ccdc28aQ8CEI3 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc28aQ8CEI3 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc28aQ8CEI3 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Ccdc28aQ8CEI3 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc28aQ8CEI3 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc28aQ8CEI3 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc28aQ8CEI3 Gm22325-201ENSMUST00000158904 308 ntBASIC18.92■□□□□ 0.62
Ccdc28aQ8CEI3 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.92■□□□□ 0.62
Ccdc28aQ8CEI3 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.92■□□□□ 0.62
Ccdc28aQ8CEI3 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc28aQ8CEI3 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc28aQ8CEI3 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc28aQ8CEI3 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc28aQ8CEI3 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc28aQ8CEI3 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc28aQ8CEI3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Ccdc28aQ8CEI3 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.91■□□□□ 0.62
Ccdc28aQ8CEI3 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc28aQ8CEI3 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Ccdc28aQ8CEI3 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc28aQ8CEI3 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc28aQ8CEI3 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc28aQ8CEI3 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Ccdc28aQ8CEI3 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc28aQ8CEI3 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Ccdc28aQ8CEI3 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc28aQ8CEI3 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc28aQ8CEI3 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc28aQ8CEI3 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc28aQ8CEI3 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc28aQ8CEI3 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc28aQ8CEI3 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc28aQ8CEI3 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc28aQ8CEI3 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Ccdc28aQ8CEI3 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.91■□□□□ 0.62
Ccdc28aQ8CEI3 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Ccdc28aQ8CEI3 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc28aQ8CEI3 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Ccdc28aQ8CEI3 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc28aQ8CEI3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc28aQ8CEI3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc28aQ8CEI3 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc28aQ8CEI3 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc28aQ8CEI3 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.9■□□□□ 0.62
Ccdc28aQ8CEI3 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
Ccdc28aQ8CEI3 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc28aQ8CEI3 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc28aQ8CEI3 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc28aQ8CEI3 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc28aQ8CEI3 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Ccdc28aQ8CEI3 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc28aQ8CEI3 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc28aQ8CEI3 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc28aQ8CEI3 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.9■□□□□ 0.62
Ccdc28aQ8CEI3 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Ccdc28aQ8CEI3 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc28aQ8CEI3 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.9■□□□□ 0.62
Ccdc28aQ8CEI3 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms