Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
Vcpip1Q8CDG3 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Vcpip1Q8CDG3 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.26■□□□□ 0.67
Vcpip1Q8CDG3 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.26■□□□□ 0.67
Vcpip1Q8CDG3 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vcpip1Q8CDG3 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vcpip1Q8CDG3 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Vcpip1Q8CDG3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vcpip1Q8CDG3 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vcpip1Q8CDG3 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vcpip1Q8CDG3 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vcpip1Q8CDG3 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vcpip1Q8CDG3 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vcpip1Q8CDG3 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vcpip1Q8CDG3 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vcpip1Q8CDG3 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vcpip1Q8CDG3 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vcpip1Q8CDG3 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vcpip1Q8CDG3 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vcpip1Q8CDG3 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Vcpip1Q8CDG3 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vcpip1Q8CDG3 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vcpip1Q8CDG3 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vcpip1Q8CDG3 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vcpip1Q8CDG3 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vcpip1Q8CDG3 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vcpip1Q8CDG3 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vcpip1Q8CDG3 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vcpip1Q8CDG3 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.24■□□□□ 0.67
Vcpip1Q8CDG3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vcpip1Q8CDG3 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Vcpip1Q8CDG3 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.24■□□□□ 0.67
Vcpip1Q8CDG3 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.24■□□□□ 0.67
Vcpip1Q8CDG3 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vcpip1Q8CDG3 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vcpip1Q8CDG3 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vcpip1Q8CDG3 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vcpip1Q8CDG3 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.23■□□□□ 0.67
Vcpip1Q8CDG3 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.23■□□□□ 0.67
Vcpip1Q8CDG3 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vcpip1Q8CDG3 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.23■□□□□ 0.67
Vcpip1Q8CDG3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Vcpip1Q8CDG3 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vcpip1Q8CDG3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vcpip1Q8CDG3 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vcpip1Q8CDG3 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Vcpip1Q8CDG3 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.23■□□□□ 0.67
Vcpip1Q8CDG3 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.23■□□□□ 0.67
Vcpip1Q8CDG3 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.23■□□□□ 0.67
Vcpip1Q8CDG3 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vcpip1Q8CDG3 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.23■□□□□ 0.67
Vcpip1Q8CDG3 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Vcpip1Q8CDG3 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vcpip1Q8CDG3 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vcpip1Q8CDG3 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vcpip1Q8CDG3 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vcpip1Q8CDG3 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vcpip1Q8CDG3 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vcpip1Q8CDG3 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vcpip1Q8CDG3 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vcpip1Q8CDG3 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vcpip1Q8CDG3 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vcpip1Q8CDG3 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Vcpip1Q8CDG3 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Vcpip1Q8CDG3 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.22■□□□□ 0.67
Vcpip1Q8CDG3 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.22■□□□□ 0.67
Vcpip1Q8CDG3 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vcpip1Q8CDG3 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vcpip1Q8CDG3 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vcpip1Q8CDG3 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Vcpip1Q8CDG3 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Vcpip1Q8CDG3 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Vcpip1Q8CDG3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vcpip1Q8CDG3 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Vcpip1Q8CDG3 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.21■□□□□ 0.67
Vcpip1Q8CDG3 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vcpip1Q8CDG3 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.21■□□□□ 0.67
Vcpip1Q8CDG3 Gm12933-201ENSMUST00000120203 872 ntBASIC19.21■□□□□ 0.67
Vcpip1Q8CDG3 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Vcpip1Q8CDG3 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vcpip1Q8CDG3 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vcpip1Q8CDG3 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Vcpip1Q8CDG3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vcpip1Q8CDG3 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
Vcpip1Q8CDG3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vcpip1Q8CDG3 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Vcpip1Q8CDG3 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vcpip1Q8CDG3 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vcpip1Q8CDG3 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vcpip1Q8CDG3 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vcpip1Q8CDG3 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vcpip1Q8CDG3 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Vcpip1Q8CDG3 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Vcpip1Q8CDG3 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vcpip1Q8CDG3 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vcpip1Q8CDG3 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.2■□□□□ 0.66
Vcpip1Q8CDG3 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.2■□□□□ 0.66
Vcpip1Q8CDG3 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vcpip1Q8CDG3 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vcpip1Q8CDG3 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms