Protein–RNA interactions for Protein: Q8CCE9

E4f1, Transcription factor E4F1, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4f1Q8CCE9 Gm10167-201ENSMUST00000150411 1479 ntBASIC21.13■□□□□ 0.97
E4f1Q8CCE9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
E4f1Q8CCE9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.12■□□□□ 0.97
E4f1Q8CCE9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
E4f1Q8CCE9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
E4f1Q8CCE9 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
E4f1Q8CCE9 Gm13836-201ENSMUST00000121159 501 ntBASIC21.12■□□□□ 0.97
E4f1Q8CCE9 Gm15847-201ENSMUST00000121417 1065 ntBASIC21.12■□□□□ 0.97
E4f1Q8CCE9 Gm15378-201ENSMUST00000121894 207 ntBASIC21.12■□□□□ 0.97
E4f1Q8CCE9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
E4f1Q8CCE9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
E4f1Q8CCE9 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
E4f1Q8CCE9 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
E4f1Q8CCE9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
E4f1Q8CCE9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
E4f1Q8CCE9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC21.12■□□□□ 0.97
E4f1Q8CCE9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
E4f1Q8CCE9 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
E4f1Q8CCE9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
E4f1Q8CCE9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
E4f1Q8CCE9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC21.11■□□□□ 0.97
E4f1Q8CCE9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
E4f1Q8CCE9 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
E4f1Q8CCE9 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
E4f1Q8CCE9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
E4f1Q8CCE9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
E4f1Q8CCE9 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
E4f1Q8CCE9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
E4f1Q8CCE9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC21.11■□□□□ 0.97
E4f1Q8CCE9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
E4f1Q8CCE9 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
E4f1Q8CCE9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
E4f1Q8CCE9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
E4f1Q8CCE9 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
E4f1Q8CCE9 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
E4f1Q8CCE9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
E4f1Q8CCE9 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
E4f1Q8CCE9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
E4f1Q8CCE9 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
E4f1Q8CCE9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
E4f1Q8CCE9 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
E4f1Q8CCE9 H2-K2-201ENSMUST00000174250 1049 ntBASIC21.1■□□□□ 0.97
E4f1Q8CCE9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
E4f1Q8CCE9 Krtap5-1-202ENSMUST00000188274 742 ntBASIC21.1■□□□□ 0.97
E4f1Q8CCE9 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
E4f1Q8CCE9 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
E4f1Q8CCE9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
E4f1Q8CCE9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
E4f1Q8CCE9 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
E4f1Q8CCE9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
E4f1Q8CCE9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC21.1■□□□□ 0.97
E4f1Q8CCE9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
E4f1Q8CCE9 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
E4f1Q8CCE9 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC21.09■□□□□ 0.97
E4f1Q8CCE9 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
E4f1Q8CCE9 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
E4f1Q8CCE9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
E4f1Q8CCE9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.09■□□□□ 0.97
E4f1Q8CCE9 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
E4f1Q8CCE9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
E4f1Q8CCE9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
E4f1Q8CCE9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
E4f1Q8CCE9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
E4f1Q8CCE9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
E4f1Q8CCE9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
E4f1Q8CCE9 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
E4f1Q8CCE9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
E4f1Q8CCE9 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
E4f1Q8CCE9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
E4f1Q8CCE9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
E4f1Q8CCE9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC21.08■□□□□ 0.97
E4f1Q8CCE9 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
E4f1Q8CCE9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
E4f1Q8CCE9 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
E4f1Q8CCE9 Gm6598-201ENSMUST00000202719 2615 ntBASIC21.08■□□□□ 0.97
E4f1Q8CCE9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC21.08■□□□□ 0.97
E4f1Q8CCE9 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
E4f1Q8CCE9 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
E4f1Q8CCE9 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
E4f1Q8CCE9 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
E4f1Q8CCE9 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
E4f1Q8CCE9 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
E4f1Q8CCE9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
E4f1Q8CCE9 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
E4f1Q8CCE9 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
E4f1Q8CCE9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
E4f1Q8CCE9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC21.07■□□□□ 0.96
E4f1Q8CCE9 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
E4f1Q8CCE9 Gm29994-201ENSMUST00000195495 1193 ntBASIC21.07■□□□□ 0.96
E4f1Q8CCE9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC21.07■□□□□ 0.96
E4f1Q8CCE9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC21.07■□□□□ 0.96
E4f1Q8CCE9 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
E4f1Q8CCE9 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
E4f1Q8CCE9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
E4f1Q8CCE9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
E4f1Q8CCE9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
E4f1Q8CCE9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
E4f1Q8CCE9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
E4f1Q8CCE9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
E4f1Q8CCE9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms