Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd4Q8CC84 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd4Q8CC84 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd4Q8CC84 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd4Q8CC84 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.14■□□□□ 0.17
Lysmd4Q8CC84 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd4Q8CC84 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd4Q8CC84 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd4Q8CC84 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lysmd4Q8CC84 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
Lysmd4Q8CC84 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lysmd4Q8CC84 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lysmd4Q8CC84 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lysmd4Q8CC84 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lysmd4Q8CC84 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Lysmd4Q8CC84 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lysmd4Q8CC84 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lysmd4Q8CC84 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Lysmd4Q8CC84 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lysmd4Q8CC84 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lysmd4Q8CC84 Gm13146-201ENSMUST00000118508 780 ntBASIC16.13■□□□□ 0.17
Lysmd4Q8CC84 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.13■□□□□ 0.17
Lysmd4Q8CC84 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Lysmd4Q8CC84 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.13■□□□□ 0.17
Lysmd4Q8CC84 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.13■□□□□ 0.17
Lysmd4Q8CC84 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lysmd4Q8CC84 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lysmd4Q8CC84 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lysmd4Q8CC84 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.13■□□□□ 0.17
Lysmd4Q8CC84 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lysmd4Q8CC84 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Lysmd4Q8CC84 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lysmd4Q8CC84 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lysmd4Q8CC84 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lysmd4Q8CC84 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lysmd4Q8CC84 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lysmd4Q8CC84 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lysmd4Q8CC84 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lysmd4Q8CC84 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lysmd4Q8CC84 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lysmd4Q8CC84 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.12■□□□□ 0.17
Lysmd4Q8CC84 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Lysmd4Q8CC84 Gm26833-201ENSMUST00000180899 440 ntBASIC16.12■□□□□ 0.17
Lysmd4Q8CC84 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lysmd4Q8CC84 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lysmd4Q8CC84 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.12■□□□□ 0.17
Lysmd4Q8CC84 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.12■□□□□ 0.17
Lysmd4Q8CC84 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lysmd4Q8CC84 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lysmd4Q8CC84 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lysmd4Q8CC84 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lysmd4Q8CC84 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lysmd4Q8CC84 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lysmd4Q8CC84 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lysmd4Q8CC84 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lysmd4Q8CC84 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Lysmd4Q8CC84 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Lysmd4Q8CC84 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
Lysmd4Q8CC84 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Lysmd4Q8CC84 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lysmd4Q8CC84 Gm6139-201ENSMUST00000079261 882 ntBASIC16.11■□□□□ 0.17
Lysmd4Q8CC84 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.11■□□□□ 0.17
Lysmd4Q8CC84 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lysmd4Q8CC84 Idnk-204ENSMUST00000226010 1898 ntBASIC16.11■□□□□ 0.17
Lysmd4Q8CC84 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Lysmd4Q8CC84 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lysmd4Q8CC84 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lysmd4Q8CC84 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lysmd4Q8CC84 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lysmd4Q8CC84 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lysmd4Q8CC84 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lysmd4Q8CC84 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lysmd4Q8CC84 Gm13534-201ENSMUST00000121169 513 ntBASIC16.1■□□□□ 0.17
Lysmd4Q8CC84 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lysmd4Q8CC84 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lysmd4Q8CC84 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lysmd4Q8CC84 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.1■□□□□ 0.17
Lysmd4Q8CC84 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lysmd4Q8CC84 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Lysmd4Q8CC84 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Lysmd4Q8CC84 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Lysmd4Q8CC84 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Lysmd4Q8CC84 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Lysmd4Q8CC84 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Lysmd4Q8CC84 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lysmd4Q8CC84 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Lysmd4Q8CC84 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lysmd4Q8CC84 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lysmd4Q8CC84 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lysmd4Q8CC84 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.09■□□□□ 0.17
Lysmd4Q8CC84 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lysmd4Q8CC84 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Lysmd4Q8CC84 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.09■□□□□ 0.17
Lysmd4Q8CC84 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Lysmd4Q8CC84 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Lysmd4Q8CC84 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Lysmd4Q8CC84 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.08■□□□□ 0.16
Lysmd4Q8CC84 Gm45417-201ENSMUST00000209533 758 ntBASIC16.08■□□□□ 0.16
Lysmd4Q8CC84 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
Lysmd4Q8CC84 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms