Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SynpoQ8CC35 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SynpoQ8CC35 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SynpoQ8CC35 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SynpoQ8CC35 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SynpoQ8CC35 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.34■□□□□ 0.37
SynpoQ8CC35 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SynpoQ8CC35 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SynpoQ8CC35 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SynpoQ8CC35 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.34■□□□□ 0.37
SynpoQ8CC35 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SynpoQ8CC35 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.34■□□□□ 0.37
SynpoQ8CC35 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SynpoQ8CC35 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SynpoQ8CC35 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SynpoQ8CC35 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SynpoQ8CC35 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.33■□□□□ 0.37
SynpoQ8CC35 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SynpoQ8CC35 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SynpoQ8CC35 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.33■□□□□ 0.36
SynpoQ8CC35 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SynpoQ8CC35 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SynpoQ8CC35 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.33■□□□□ 0.36
SynpoQ8CC35 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SynpoQ8CC35 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SynpoQ8CC35 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SynpoQ8CC35 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SynpoQ8CC35 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SynpoQ8CC35 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SynpoQ8CC35 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SynpoQ8CC35 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SynpoQ8CC35 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SynpoQ8CC35 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SynpoQ8CC35 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SynpoQ8CC35 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.32■□□□□ 0.36
SynpoQ8CC35 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SynpoQ8CC35 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SynpoQ8CC35 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SynpoQ8CC35 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SynpoQ8CC35 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SynpoQ8CC35 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SynpoQ8CC35 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SynpoQ8CC35 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SynpoQ8CC35 Gm10812-201ENSMUST00000099864 546 ntBASIC17.32■□□□□ 0.36
SynpoQ8CC35 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SynpoQ8CC35 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SynpoQ8CC35 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SynpoQ8CC35 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.31■□□□□ 0.36
SynpoQ8CC35 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.31■□□□□ 0.36
SynpoQ8CC35 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SynpoQ8CC35 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SynpoQ8CC35 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SynpoQ8CC35 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SynpoQ8CC35 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SynpoQ8CC35 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
SynpoQ8CC35 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SynpoQ8CC35 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SynpoQ8CC35 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SynpoQ8CC35 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SynpoQ8CC35 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
SynpoQ8CC35 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SynpoQ8CC35 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SynpoQ8CC35 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SynpoQ8CC35 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SynpoQ8CC35 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SynpoQ8CC35 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SynpoQ8CC35 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SynpoQ8CC35 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SynpoQ8CC35 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SynpoQ8CC35 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SynpoQ8CC35 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
SynpoQ8CC35 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.3■□□□□ 0.36
SynpoQ8CC35 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.3■□□□□ 0.36
SynpoQ8CC35 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.3■□□□□ 0.36
SynpoQ8CC35 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
SynpoQ8CC35 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.3■□□□□ 0.36
SynpoQ8CC35 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SynpoQ8CC35 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.3■□□□□ 0.36
SynpoQ8CC35 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SynpoQ8CC35 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SynpoQ8CC35 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SynpoQ8CC35 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SynpoQ8CC35 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SynpoQ8CC35 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SynpoQ8CC35 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SynpoQ8CC35 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SynpoQ8CC35 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SynpoQ8CC35 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SynpoQ8CC35 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SynpoQ8CC35 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.29■□□□□ 0.36
SynpoQ8CC35 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.29■□□□□ 0.36
SynpoQ8CC35 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SynpoQ8CC35 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SynpoQ8CC35 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SynpoQ8CC35 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SynpoQ8CC35 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SynpoQ8CC35 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.29■□□□□ 0.36
SynpoQ8CC35 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.29■□□□□ 0.36
SynpoQ8CC35 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SynpoQ8CC35 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms