Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shisa4Q8CA71 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shisa4Q8CA71 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shisa4Q8CA71 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shisa4Q8CA71 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shisa4Q8CA71 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Shisa4Q8CA71 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.94■□□□□ 0.94
Shisa4Q8CA71 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shisa4Q8CA71 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shisa4Q8CA71 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shisa4Q8CA71 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Shisa4Q8CA71 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shisa4Q8CA71 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shisa4Q8CA71 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shisa4Q8CA71 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shisa4Q8CA71 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shisa4Q8CA71 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Shisa4Q8CA71 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Shisa4Q8CA71 Mir6349-201ENSMUST00000184059 97 ntBASIC20.93■□□□□ 0.94
Shisa4Q8CA71 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Shisa4Q8CA71 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Shisa4Q8CA71 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Shisa4Q8CA71 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Shisa4Q8CA71 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Shisa4Q8CA71 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Shisa4Q8CA71 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Shisa4Q8CA71 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.92■□□□□ 0.94
Shisa4Q8CA71 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Shisa4Q8CA71 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.92■□□□□ 0.94
Shisa4Q8CA71 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shisa4Q8CA71 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Shisa4Q8CA71 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shisa4Q8CA71 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shisa4Q8CA71 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shisa4Q8CA71 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shisa4Q8CA71 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.92■□□□□ 0.94
Shisa4Q8CA71 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shisa4Q8CA71 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shisa4Q8CA71 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Shisa4Q8CA71 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shisa4Q8CA71 Rarb-207ENSMUST00000225921 2756 ntBASIC20.91■□□□□ 0.94
Shisa4Q8CA71 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Shisa4Q8CA71 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Shisa4Q8CA71 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Shisa4Q8CA71 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Shisa4Q8CA71 Gm13401-201ENSMUST00000117074 291 ntBASIC20.91■□□□□ 0.94
Shisa4Q8CA71 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Shisa4Q8CA71 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Shisa4Q8CA71 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Shisa4Q8CA71 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Shisa4Q8CA71 Gm43183-201ENSMUST00000200632 547 ntBASIC20.91■□□□□ 0.94
Shisa4Q8CA71 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Shisa4Q8CA71 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Shisa4Q8CA71 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Shisa4Q8CA71 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Shisa4Q8CA71 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
Shisa4Q8CA71 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Shisa4Q8CA71 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shisa4Q8CA71 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shisa4Q8CA71 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.9■□□□□ 0.94
Shisa4Q8CA71 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shisa4Q8CA71 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shisa4Q8CA71 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shisa4Q8CA71 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shisa4Q8CA71 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shisa4Q8CA71 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shisa4Q8CA71 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Shisa4Q8CA71 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.9■□□□□ 0.94
Shisa4Q8CA71 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.9■□□□□ 0.94
Shisa4Q8CA71 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Shisa4Q8CA71 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shisa4Q8CA71 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shisa4Q8CA71 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shisa4Q8CA71 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shisa4Q8CA71 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shisa4Q8CA71 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Shisa4Q8CA71 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Shisa4Q8CA71 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Shisa4Q8CA71 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Shisa4Q8CA71 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Shisa4Q8CA71 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.89■□□□□ 0.93
Shisa4Q8CA71 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Shisa4Q8CA71 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Shisa4Q8CA71 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Shisa4Q8CA71 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Shisa4Q8CA71 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Shisa4Q8CA71 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Shisa4Q8CA71 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Shisa4Q8CA71 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Shisa4Q8CA71 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.88■□□□□ 0.93
Shisa4Q8CA71 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Shisa4Q8CA71 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Shisa4Q8CA71 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Shisa4Q8CA71 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.88■□□□□ 0.93
Shisa4Q8CA71 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Shisa4Q8CA71 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Shisa4Q8CA71 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Shisa4Q8CA71 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Shisa4Q8CA71 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Shisa4Q8CA71 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms