Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc46a2Q8CA03 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc46a2Q8CA03 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Slc46a2Q8CA03 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc46a2Q8CA03 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc46a2Q8CA03 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc46a2Q8CA03 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Slc46a2Q8CA03 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Slc46a2Q8CA03 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Slc46a2Q8CA03 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Slc46a2Q8CA03 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc46a2Q8CA03 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc46a2Q8CA03 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Slc46a2Q8CA03 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Slc46a2Q8CA03 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Slc46a2Q8CA03 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
Slc46a2Q8CA03 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Slc46a2Q8CA03 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc46a2Q8CA03 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Slc46a2Q8CA03 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc46a2Q8CA03 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Slc46a2Q8CA03 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc46a2Q8CA03 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.24■□□□□ 0.35
Slc46a2Q8CA03 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc46a2Q8CA03 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Slc46a2Q8CA03 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Slc46a2Q8CA03 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Slc46a2Q8CA03 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc46a2Q8CA03 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc46a2Q8CA03 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Slc46a2Q8CA03 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc46a2Q8CA03 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc46a2Q8CA03 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Slc46a2Q8CA03 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Slc46a2Q8CA03 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Slc46a2Q8CA03 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc46a2Q8CA03 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc46a2Q8CA03 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Slc46a2Q8CA03 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc46a2Q8CA03 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.24■□□□□ 0.35
Slc46a2Q8CA03 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc46a2Q8CA03 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Slc46a2Q8CA03 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc46a2Q8CA03 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc46a2Q8CA03 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.23■□□□□ 0.35
Slc46a2Q8CA03 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.23■□□□□ 0.35
Slc46a2Q8CA03 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Slc46a2Q8CA03 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.23■□□□□ 0.35
Slc46a2Q8CA03 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
Slc46a2Q8CA03 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc46a2Q8CA03 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc46a2Q8CA03 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc46a2Q8CA03 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc46a2Q8CA03 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc46a2Q8CA03 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc46a2Q8CA03 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc46a2Q8CA03 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc46a2Q8CA03 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Slc46a2Q8CA03 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc46a2Q8CA03 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc46a2Q8CA03 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc46a2Q8CA03 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Slc46a2Q8CA03 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Slc46a2Q8CA03 Idnk-204ENSMUST00000226010 1898 ntBASIC17.22■□□□□ 0.35
Slc46a2Q8CA03 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Slc46a2Q8CA03 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Slc46a2Q8CA03 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc46a2Q8CA03 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc46a2Q8CA03 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.22■□□□□ 0.35
Slc46a2Q8CA03 Gm13146-201ENSMUST00000118508 780 ntBASIC17.22■□□□□ 0.35
Slc46a2Q8CA03 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Slc46a2Q8CA03 Gm26833-201ENSMUST00000180899 440 ntBASIC17.22■□□□□ 0.35
Slc46a2Q8CA03 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.22■□□□□ 0.35
Slc46a2Q8CA03 Gm40848-201ENSMUST00000221998 324 ntBASIC17.22■□□□□ 0.35
Slc46a2Q8CA03 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc46a2Q8CA03 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc46a2Q8CA03 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc46a2Q8CA03 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Slc46a2Q8CA03 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Slc46a2Q8CA03 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc46a2Q8CA03 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Slc46a2Q8CA03 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc46a2Q8CA03 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc46a2Q8CA03 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Slc46a2Q8CA03 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
Slc46a2Q8CA03 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc46a2Q8CA03 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc46a2Q8CA03 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.21■□□□□ 0.35
Slc46a2Q8CA03 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc46a2Q8CA03 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Slc46a2Q8CA03 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc46a2Q8CA03 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Slc46a2Q8CA03 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc46a2Q8CA03 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.2■□□□□ 0.34
Slc46a2Q8CA03 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc46a2Q8CA03 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc46a2Q8CA03 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc46a2Q8CA03 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Slc46a2Q8CA03 Gm22325-201ENSMUST00000158904 308 ntBASIC17.2■□□□□ 0.34
Slc46a2Q8CA03 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms