Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Rtp1Q8C8C1 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtp1Q8C8C1 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rtp1Q8C8C1 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Rtp1Q8C8C1 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtp1Q8C8C1 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtp1Q8C8C1 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
Rtp1Q8C8C1 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Rtp1Q8C8C1 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Rtp1Q8C8C1 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rtp1Q8C8C1 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC20.53■□□□□ 0.88
Rtp1Q8C8C1 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rtp1Q8C8C1 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rtp1Q8C8C1 Umpk-ps-201ENSMUST00000211897 827 ntBASIC20.53■□□□□ 0.88
Rtp1Q8C8C1 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rtp1Q8C8C1 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtp1Q8C8C1 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtp1Q8C8C1 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Rtp1Q8C8C1 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtp1Q8C8C1 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtp1Q8C8C1 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtp1Q8C8C1 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtp1Q8C8C1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtp1Q8C8C1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtp1Q8C8C1 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Rtp1Q8C8C1 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
Rtp1Q8C8C1 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtp1Q8C8C1 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtp1Q8C8C1 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtp1Q8C8C1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtp1Q8C8C1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtp1Q8C8C1 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Rtp1Q8C8C1 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.52■□□□□ 0.88
Rtp1Q8C8C1 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.52■□□□□ 0.88
Rtp1Q8C8C1 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rtp1Q8C8C1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtp1Q8C8C1 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtp1Q8C8C1 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rtp1Q8C8C1 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtp1Q8C8C1 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.87
Rtp1Q8C8C1 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtp1Q8C8C1 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rtp1Q8C8C1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtp1Q8C8C1 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtp1Q8C8C1 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rtp1Q8C8C1 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.51■□□□□ 0.87
Rtp1Q8C8C1 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtp1Q8C8C1 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtp1Q8C8C1 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rtp1Q8C8C1 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtp1Q8C8C1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtp1Q8C8C1 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtp1Q8C8C1 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtp1Q8C8C1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Rtp1Q8C8C1 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC20.5■□□□□ 0.87
Rtp1Q8C8C1 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rtp1Q8C8C1 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Rtp1Q8C8C1 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC20.5■□□□□ 0.87
Rtp1Q8C8C1 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtp1Q8C8C1 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtp1Q8C8C1 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtp1Q8C8C1 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtp1Q8C8C1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rtp1Q8C8C1 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtp1Q8C8C1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtp1Q8C8C1 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.49■□□□□ 0.87
Rtp1Q8C8C1 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rtp1Q8C8C1 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.49■□□□□ 0.87
Rtp1Q8C8C1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rtp1Q8C8C1 Gm18669-201ENSMUST00000216049 778 ntBASIC20.49■□□□□ 0.87
Rtp1Q8C8C1 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rtp1Q8C8C1 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rtp1Q8C8C1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Rtp1Q8C8C1 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rtp1Q8C8C1 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Rtp1Q8C8C1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rtp1Q8C8C1 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtp1Q8C8C1 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtp1Q8C8C1 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtp1Q8C8C1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
Rtp1Q8C8C1 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.48■□□□□ 0.87
Rtp1Q8C8C1 Gm5587-201ENSMUST00000206270 674 ntBASIC20.48■□□□□ 0.87
Rtp1Q8C8C1 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rtp1Q8C8C1 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtp1Q8C8C1 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Rtp1Q8C8C1 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtp1Q8C8C1 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtp1Q8C8C1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtp1Q8C8C1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtp1Q8C8C1 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Rtp1Q8C8C1 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.47■□□□□ 0.87
Rtp1Q8C8C1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtp1Q8C8C1 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.47■□□□□ 0.87
Rtp1Q8C8C1 Gm16061-201ENSMUST00000122167 857 ntBASIC20.47■□□□□ 0.87
Rtp1Q8C8C1 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC20.47■□□□□ 0.87
Rtp1Q8C8C1 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rtp1Q8C8C1 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtp1Q8C8C1 Gm5867-201ENSMUST00000063197 592 ntBASIC20.47■□□□□ 0.87
Rtp1Q8C8C1 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rtp1Q8C8C1 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms