Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cfap54Q8C6S9 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cfap54Q8C6S9 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cfap54Q8C6S9 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Cfap54Q8C6S9 Gm27463-201ENSMUST00000183569 57 ntBASIC17.27■□□□□ 0.36
Cfap54Q8C6S9 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cfap54Q8C6S9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cfap54Q8C6S9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cfap54Q8C6S9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cfap54Q8C6S9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Cfap54Q8C6S9 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cfap54Q8C6S9 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cfap54Q8C6S9 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Cfap54Q8C6S9 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cfap54Q8C6S9 Gm5867-201ENSMUST00000063197 592 ntBASIC17.27■□□□□ 0.36
Cfap54Q8C6S9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cfap54Q8C6S9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cfap54Q8C6S9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cfap54Q8C6S9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cfap54Q8C6S9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cfap54Q8C6S9 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cfap54Q8C6S9 Gm5587-201ENSMUST00000206270 674 ntBASIC17.27■□□□□ 0.35
Cfap54Q8C6S9 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.27■□□□□ 0.35
Cfap54Q8C6S9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Cfap54Q8C6S9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cfap54Q8C6S9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cfap54Q8C6S9 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.26■□□□□ 0.35
Cfap54Q8C6S9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cfap54Q8C6S9 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.26■□□□□ 0.35
Cfap54Q8C6S9 Gm29518-201ENSMUST00000190858 372 ntBASIC17.26■□□□□ 0.35
Cfap54Q8C6S9 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cfap54Q8C6S9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cfap54Q8C6S9 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cfap54Q8C6S9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cfap54Q8C6S9 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cfap54Q8C6S9 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cfap54Q8C6S9 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.26■□□□□ 0.35
Cfap54Q8C6S9 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.26■□□□□ 0.35
Cfap54Q8C6S9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.26■□□□□ 0.35
Cfap54Q8C6S9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cfap54Q8C6S9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cfap54Q8C6S9 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Cfap54Q8C6S9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cfap54Q8C6S9 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cfap54Q8C6S9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cfap54Q8C6S9 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cfap54Q8C6S9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cfap54Q8C6S9 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.25■□□□□ 0.35
Cfap54Q8C6S9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Cfap54Q8C6S9 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cfap54Q8C6S9 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.25■□□□□ 0.35
Cfap54Q8C6S9 Gm7791-201ENSMUST00000219066 539 ntBASIC17.25■□□□□ 0.35
Cfap54Q8C6S9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cfap54Q8C6S9 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cfap54Q8C6S9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cfap54Q8C6S9 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cfap54Q8C6S9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cfap54Q8C6S9 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap54Q8C6S9 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Cfap54Q8C6S9 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.24■□□□□ 0.35
Cfap54Q8C6S9 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap54Q8C6S9 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Cfap54Q8C6S9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap54Q8C6S9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Cfap54Q8C6S9 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap54Q8C6S9 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Cfap54Q8C6S9 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap54Q8C6S9 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap54Q8C6S9 Gm18669-201ENSMUST00000216049 778 ntBASIC17.24■□□□□ 0.35
Cfap54Q8C6S9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap54Q8C6S9 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.23■□□□□ 0.35
Cfap54Q8C6S9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cfap54Q8C6S9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cfap54Q8C6S9 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.23■□□□□ 0.35
Cfap54Q8C6S9 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cfap54Q8C6S9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Cfap54Q8C6S9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.23■□□□□ 0.35
Cfap54Q8C6S9 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cfap54Q8C6S9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cfap54Q8C6S9 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cfap54Q8C6S9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cfap54Q8C6S9 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.22■□□□□ 0.35
Cfap54Q8C6S9 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Cfap54Q8C6S9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cfap54Q8C6S9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cfap54Q8C6S9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cfap54Q8C6S9 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Cfap54Q8C6S9 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.22■□□□□ 0.35
Cfap54Q8C6S9 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.22■□□□□ 0.35
Cfap54Q8C6S9 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Cfap54Q8C6S9 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cfap54Q8C6S9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cfap54Q8C6S9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cfap54Q8C6S9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cfap54Q8C6S9 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfap54Q8C6S9 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.21■□□□□ 0.35
Cfap54Q8C6S9 Gm25016-201ENSMUST00000158399 131 ntBASIC17.21■□□□□ 0.35
Cfap54Q8C6S9 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cfap54Q8C6S9 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfap54Q8C6S9 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms