Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Col6a6Q8C6K9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Col6a6Q8C6K9 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col6a6Q8C6K9 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.19■□□□□ 0.18
Col6a6Q8C6K9 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col6a6Q8C6K9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col6a6Q8C6K9 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col6a6Q8C6K9 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.19■□□□□ 0.18
Col6a6Q8C6K9 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Col6a6Q8C6K9 Gm9013-201ENSMUST00000132939 882 ntBASIC16.19■□□□□ 0.18
Col6a6Q8C6K9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col6a6Q8C6K9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col6a6Q8C6K9 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col6a6Q8C6K9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col6a6Q8C6K9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col6a6Q8C6K9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col6a6Q8C6K9 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Col6a6Q8C6K9 Gm22697-201ENSMUST00000175194 63 ntBASIC16.18■□□□□ 0.18
Col6a6Q8C6K9 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.18■□□□□ 0.18
Col6a6Q8C6K9 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Col6a6Q8C6K9 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.18■□□□□ 0.18
Col6a6Q8C6K9 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col6a6Q8C6K9 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col6a6Q8C6K9 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col6a6Q8C6K9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col6a6Q8C6K9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col6a6Q8C6K9 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col6a6Q8C6K9 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Col6a6Q8C6K9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.17■□□□□ 0.18
Col6a6Q8C6K9 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col6a6Q8C6K9 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col6a6Q8C6K9 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col6a6Q8C6K9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Col6a6Q8C6K9 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col6a6Q8C6K9 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col6a6Q8C6K9 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col6a6Q8C6K9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col6a6Q8C6K9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col6a6Q8C6K9 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col6a6Q8C6K9 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col6a6Q8C6K9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col6a6Q8C6K9 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col6a6Q8C6K9 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col6a6Q8C6K9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Col6a6Q8C6K9 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.17■□□□□ 0.18
Col6a6Q8C6K9 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col6a6Q8C6K9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col6a6Q8C6K9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col6a6Q8C6K9 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col6a6Q8C6K9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Col6a6Q8C6K9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col6a6Q8C6K9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col6a6Q8C6K9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col6a6Q8C6K9 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.16■□□□□ 0.18
Col6a6Q8C6K9 Gm17661-201ENSMUST00000170317 270 ntBASIC16.16■□□□□ 0.18
Col6a6Q8C6K9 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Col6a6Q8C6K9 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Col6a6Q8C6K9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Col6a6Q8C6K9 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Col6a6Q8C6K9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col6a6Q8C6K9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Col6a6Q8C6K9 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col6a6Q8C6K9 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.16■□□□□ 0.18
Col6a6Q8C6K9 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.16■□□□□ 0.18
Col6a6Q8C6K9 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.16■□□□□ 0.18
Col6a6Q8C6K9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col6a6Q8C6K9 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Col6a6Q8C6K9 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col6a6Q8C6K9 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col6a6Q8C6K9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col6a6Q8C6K9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col6a6Q8C6K9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Col6a6Q8C6K9 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Col6a6Q8C6K9 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col6a6Q8C6K9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col6a6Q8C6K9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Col6a6Q8C6K9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col6a6Q8C6K9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col6a6Q8C6K9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col6a6Q8C6K9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Col6a6Q8C6K9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col6a6Q8C6K9 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col6a6Q8C6K9 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Col6a6Q8C6K9 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Col6a6Q8C6K9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col6a6Q8C6K9 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Col6a6Q8C6K9 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.14■□□□□ 0.17
Col6a6Q8C6K9 Mir2861-201ENSMUST00000175539 82 ntBASIC16.14■□□□□ 0.17
Col6a6Q8C6K9 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.14■□□□□ 0.17
Col6a6Q8C6K9 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Col6a6Q8C6K9 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col6a6Q8C6K9 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col6a6Q8C6K9 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col6a6Q8C6K9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col6a6Q8C6K9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col6a6Q8C6K9 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col6a6Q8C6K9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col6a6Q8C6K9 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.14■□□□□ 0.17
Col6a6Q8C6K9 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col6a6Q8C6K9 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms