Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.86■□□□□ 0.77
Trim47Q8C0E3 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim47Q8C0E3 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim47Q8C0E3 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Trim47Q8C0E3 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim47Q8C0E3 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim47Q8C0E3 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim47Q8C0E3 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim47Q8C0E3 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Trim47Q8C0E3 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim47Q8C0E3 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Trim47Q8C0E3 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.85■□□□□ 0.77
Trim47Q8C0E3 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.85■□□□□ 0.77
Trim47Q8C0E3 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim47Q8C0E3 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim47Q8C0E3 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim47Q8C0E3 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim47Q8C0E3 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.84■□□□□ 0.77
Trim47Q8C0E3 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim47Q8C0E3 Mir1199-201ENSMUST00000117015 119 ntBASIC19.84■□□□□ 0.77
Trim47Q8C0E3 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim47Q8C0E3 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim47Q8C0E3 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Trim47Q8C0E3 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Trim47Q8C0E3 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim47Q8C0E3 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Trim47Q8C0E3 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.84■□□□□ 0.77
Trim47Q8C0E3 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim47Q8C0E3 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim47Q8C0E3 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.84■□□□□ 0.77
Trim47Q8C0E3 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim47Q8C0E3 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim47Q8C0E3 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim47Q8C0E3 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trim47Q8C0E3 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim47Q8C0E3 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim47Q8C0E3 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.83■□□□□ 0.77
Trim47Q8C0E3 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trim47Q8C0E3 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Trim47Q8C0E3 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Trim47Q8C0E3 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim47Q8C0E3 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim47Q8C0E3 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.83■□□□□ 0.76
Trim47Q8C0E3 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Trim47Q8C0E3 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Trim47Q8C0E3 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
Trim47Q8C0E3 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim47Q8C0E3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim47Q8C0E3 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trim47Q8C0E3 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.82■□□□□ 0.76
Trim47Q8C0E3 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trim47Q8C0E3 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim47Q8C0E3 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.82■□□□□ 0.76
Trim47Q8C0E3 Gm6576-201ENSMUST00000169678 883 ntBASIC19.82■□□□□ 0.76
Trim47Q8C0E3 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.82■□□□□ 0.76
Trim47Q8C0E3 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.82■□□□□ 0.76
Trim47Q8C0E3 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim47Q8C0E3 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim47Q8C0E3 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim47Q8C0E3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trim47Q8C0E3 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim47Q8C0E3 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.81■□□□□ 0.76
Trim47Q8C0E3 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.81■□□□□ 0.76
Trim47Q8C0E3 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Trim47Q8C0E3 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Trim47Q8C0E3 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trim47Q8C0E3 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim47Q8C0E3 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim47Q8C0E3 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.81■□□□□ 0.76
Trim47Q8C0E3 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Trim47Q8C0E3 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.81■□□□□ 0.76
Trim47Q8C0E3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Trim47Q8C0E3 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim47Q8C0E3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Trim47Q8C0E3 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.81■□□□□ 0.76
Trim47Q8C0E3 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trim47Q8C0E3 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim47Q8C0E3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim47Q8C0E3 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim47Q8C0E3 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim47Q8C0E3 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.8■□□□□ 0.76
Trim47Q8C0E3 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim47Q8C0E3 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim47Q8C0E3 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim47Q8C0E3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Trim47Q8C0E3 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim47Q8C0E3 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim47Q8C0E3 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim47Q8C0E3 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.8■□□□□ 0.76
Trim47Q8C0E3 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.8■□□□□ 0.76
Trim47Q8C0E3 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Trim47Q8C0E3 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
Trim47Q8C0E3 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trim47Q8C0E3 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trim47Q8C0E3 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Trim47Q8C0E3 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Trim47Q8C0E3 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim47Q8C0E3 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trim47Q8C0E3 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.79■□□□□ 0.76
Trim47Q8C0E3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms