Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trerf1Q8BXJ2 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Trerf1Q8BXJ2 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trerf1Q8BXJ2 Gm13148-201ENSMUST00000118892 745 ntBASIC18.85■□□□□ 0.61
Trerf1Q8BXJ2 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trerf1Q8BXJ2 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Trerf1Q8BXJ2 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trerf1Q8BXJ2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trerf1Q8BXJ2 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trerf1Q8BXJ2 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trerf1Q8BXJ2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.84■□□□□ 0.61
Trerf1Q8BXJ2 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trerf1Q8BXJ2 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trerf1Q8BXJ2 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trerf1Q8BXJ2 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trerf1Q8BXJ2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trerf1Q8BXJ2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trerf1Q8BXJ2 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trerf1Q8BXJ2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Trerf1Q8BXJ2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trerf1Q8BXJ2 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.84■□□□□ 0.61
Trerf1Q8BXJ2 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Trerf1Q8BXJ2 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.84■□□□□ 0.61
Trerf1Q8BXJ2 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trerf1Q8BXJ2 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trerf1Q8BXJ2 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trerf1Q8BXJ2 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trerf1Q8BXJ2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Trerf1Q8BXJ2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.84■□□□□ 0.61
Trerf1Q8BXJ2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trerf1Q8BXJ2 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Trerf1Q8BXJ2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trerf1Q8BXJ2 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
Trerf1Q8BXJ2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trerf1Q8BXJ2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trerf1Q8BXJ2 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trerf1Q8BXJ2 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trerf1Q8BXJ2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trerf1Q8BXJ2 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.83■□□□□ 0.61
Trerf1Q8BXJ2 Gm6211-202ENSMUST00000167849 925 ntBASIC18.83■□□□□ 0.6
Trerf1Q8BXJ2 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trerf1Q8BXJ2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trerf1Q8BXJ2 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trerf1Q8BXJ2 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Trerf1Q8BXJ2 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trerf1Q8BXJ2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trerf1Q8BXJ2 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trerf1Q8BXJ2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trerf1Q8BXJ2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trerf1Q8BXJ2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trerf1Q8BXJ2 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.82■□□□□ 0.6
Trerf1Q8BXJ2 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trerf1Q8BXJ2 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trerf1Q8BXJ2 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trerf1Q8BXJ2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trerf1Q8BXJ2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Trerf1Q8BXJ2 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trerf1Q8BXJ2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Trerf1Q8BXJ2 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trerf1Q8BXJ2 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trerf1Q8BXJ2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.81■□□□□ 0.6
Trerf1Q8BXJ2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trerf1Q8BXJ2 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.81■□□□□ 0.6
Trerf1Q8BXJ2 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trerf1Q8BXJ2 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trerf1Q8BXJ2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trerf1Q8BXJ2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trerf1Q8BXJ2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trerf1Q8BXJ2 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trerf1Q8BXJ2 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trerf1Q8BXJ2 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trerf1Q8BXJ2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trerf1Q8BXJ2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.8■□□□□ 0.6
Trerf1Q8BXJ2 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trerf1Q8BXJ2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trerf1Q8BXJ2 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trerf1Q8BXJ2 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trerf1Q8BXJ2 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Trerf1Q8BXJ2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trerf1Q8BXJ2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trerf1Q8BXJ2 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trerf1Q8BXJ2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trerf1Q8BXJ2 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trerf1Q8BXJ2 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Trerf1Q8BXJ2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.79■□□□□ 0.6
Trerf1Q8BXJ2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trerf1Q8BXJ2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trerf1Q8BXJ2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trerf1Q8BXJ2 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Trerf1Q8BXJ2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.79■□□□□ 0.6
Trerf1Q8BXJ2 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.79■□□□□ 0.6
Trerf1Q8BXJ2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Trerf1Q8BXJ2 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.79■□□□□ 0.6
Trerf1Q8BXJ2 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Trerf1Q8BXJ2 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Trerf1Q8BXJ2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.79■□□□□ 0.6
Trerf1Q8BXJ2 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trerf1Q8BXJ2 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trerf1Q8BXJ2 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Trerf1Q8BXJ2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms