Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Cdk5rap1Q8BTW8 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.02■□□□□ 0.31
Cdk5rap1Q8BTW8 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.02■□□□□ 0.31
Cdk5rap1Q8BTW8 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cdk5rap1Q8BTW8 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cdk5rap1Q8BTW8 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cdk5rap1Q8BTW8 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Cdk5rap1Q8BTW8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Cdk5rap1Q8BTW8 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdk5rap1Q8BTW8 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cdk5rap1Q8BTW8 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdk5rap1Q8BTW8 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Cdk5rap1Q8BTW8 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cdk5rap1Q8BTW8 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cdk5rap1Q8BTW8 Mir2861-201ENSMUST00000175539 82 ntBASIC17.01■□□□□ 0.31
Cdk5rap1Q8BTW8 Mir7071-201ENSMUST00000184847 69 ntBASIC17.01■□□□□ 0.31
Cdk5rap1Q8BTW8 Gm37292-201ENSMUST00000192062 758 ntBASIC17.01■□□□□ 0.31
Cdk5rap1Q8BTW8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.01■□□□□ 0.31
Cdk5rap1Q8BTW8 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdk5rap1Q8BTW8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdk5rap1Q8BTW8 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.01■□□□□ 0.31
Cdk5rap1Q8BTW8 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Cdk5rap1Q8BTW8 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdk5rap1Q8BTW8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdk5rap1Q8BTW8 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cdk5rap1Q8BTW8 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdk5rap1Q8BTW8 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdk5rap1Q8BTW8 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cdk5rap1Q8BTW8 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cdk5rap1Q8BTW8 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdk5rap1Q8BTW8 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Cdk5rap1Q8BTW8 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17■□□□□ 0.31
Cdk5rap1Q8BTW8 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17■□□□□ 0.31
Cdk5rap1Q8BTW8 Gm37055-201ENSMUST00000191866 133 ntBASIC17■□□□□ 0.31
Cdk5rap1Q8BTW8 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Cdk5rap1Q8BTW8 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17■□□□□ 0.31
Cdk5rap1Q8BTW8 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Cdk5rap1Q8BTW8 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdk5rap1Q8BTW8 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Cdk5rap1Q8BTW8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdk5rap1Q8BTW8 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Cdk5rap1Q8BTW8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdk5rap1Q8BTW8 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdk5rap1Q8BTW8 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdk5rap1Q8BTW8 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdk5rap1Q8BTW8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.99■□□□□ 0.31
Cdk5rap1Q8BTW8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.99■□□□□ 0.31
Cdk5rap1Q8BTW8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdk5rap1Q8BTW8 Mir5122-201ENSMUST00000175004 89 ntBASIC16.99■□□□□ 0.31
Cdk5rap1Q8BTW8 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.99■□□□□ 0.31
Cdk5rap1Q8BTW8 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.99■□□□□ 0.31
Cdk5rap1Q8BTW8 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdk5rap1Q8BTW8 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Cdk5rap1Q8BTW8 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdk5rap1Q8BTW8 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cdk5rap1Q8BTW8 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdk5rap1Q8BTW8 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdk5rap1Q8BTW8 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdk5rap1Q8BTW8 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdk5rap1Q8BTW8 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Cdk5rap1Q8BTW8 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdk5rap1Q8BTW8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Cdk5rap1Q8BTW8 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Cdk5rap1Q8BTW8 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.98■□□□□ 0.31
Cdk5rap1Q8BTW8 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Cdk5rap1Q8BTW8 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdk5rap1Q8BTW8 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
Cdk5rap1Q8BTW8 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdk5rap1Q8BTW8 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Cdk5rap1Q8BTW8 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.98■□□□□ 0.31
Cdk5rap1Q8BTW8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk5rap1Q8BTW8 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Cdk5rap1Q8BTW8 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk5rap1Q8BTW8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk5rap1Q8BTW8 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk5rap1Q8BTW8 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk5rap1Q8BTW8 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk5rap1Q8BTW8 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk5rap1Q8BTW8 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.97■□□□□ 0.31
Cdk5rap1Q8BTW8 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk5rap1Q8BTW8 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.97■□□□□ 0.31
Cdk5rap1Q8BTW8 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.97■□□□□ 0.31
Cdk5rap1Q8BTW8 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk5rap1Q8BTW8 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk5rap1Q8BTW8 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk5rap1Q8BTW8 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk5rap1Q8BTW8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Cdk5rap1Q8BTW8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk5rap1Q8BTW8 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdk5rap1Q8BTW8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Cdk5rap1Q8BTW8 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.96■□□□□ 0.31
Cdk5rap1Q8BTW8 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.96■□□□□ 0.31
Cdk5rap1Q8BTW8 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Cdk5rap1Q8BTW8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdk5rap1Q8BTW8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdk5rap1Q8BTW8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdk5rap1Q8BTW8 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Cdk5rap1Q8BTW8 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cdk5rap1Q8BTW8 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Cdk5rap1Q8BTW8 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms