Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.06■□□□□ 0.64
Rd3Q8BRE0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rd3Q8BRE0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rd3Q8BRE0 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.06■□□□□ 0.64
Rd3Q8BRE0 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rd3Q8BRE0 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Rd3Q8BRE0 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rd3Q8BRE0 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.05■□□□□ 0.64
Rd3Q8BRE0 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rd3Q8BRE0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rd3Q8BRE0 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rd3Q8BRE0 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.05■□□□□ 0.64
Rd3Q8BRE0 Gm11539-201ENSMUST00000119837 557 ntBASIC19.05■□□□□ 0.64
Rd3Q8BRE0 Gm13436-201ENSMUST00000120418 567 ntBASIC19.05■□□□□ 0.64
Rd3Q8BRE0 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rd3Q8BRE0 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rd3Q8BRE0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rd3Q8BRE0 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rd3Q8BRE0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rd3Q8BRE0 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Rd3Q8BRE0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rd3Q8BRE0 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rd3Q8BRE0 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Rd3Q8BRE0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rd3Q8BRE0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rd3Q8BRE0 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rd3Q8BRE0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rd3Q8BRE0 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.04■□□□□ 0.64
Rd3Q8BRE0 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rd3Q8BRE0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rd3Q8BRE0 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rd3Q8BRE0 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rd3Q8BRE0 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rd3Q8BRE0 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.04■□□□□ 0.64
Rd3Q8BRE0 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Rd3Q8BRE0 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rd3Q8BRE0 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.04■□□□□ 0.64
Rd3Q8BRE0 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rd3Q8BRE0 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rd3Q8BRE0 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rd3Q8BRE0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rd3Q8BRE0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
Rd3Q8BRE0 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rd3Q8BRE0 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.03■□□□□ 0.64
Rd3Q8BRE0 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Rd3Q8BRE0 Odf3b-204ENSMUST00000227834 930 ntBASIC19.03■□□□□ 0.64
Rd3Q8BRE0 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Rd3Q8BRE0 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rd3Q8BRE0 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rd3Q8BRE0 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.03■□□□□ 0.64
Rd3Q8BRE0 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rd3Q8BRE0 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rd3Q8BRE0 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rd3Q8BRE0 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rd3Q8BRE0 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Rd3Q8BRE0 Gm13559-201ENSMUST00000120476 863 ntBASIC19.02■□□□□ 0.64
Rd3Q8BRE0 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rd3Q8BRE0 Gm3375-201ENSMUST00000203929 796 ntBASIC19.02■□□□□ 0.64
Rd3Q8BRE0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rd3Q8BRE0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rd3Q8BRE0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rd3Q8BRE0 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Rd3Q8BRE0 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rd3Q8BRE0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Rd3Q8BRE0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rd3Q8BRE0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rd3Q8BRE0 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rd3Q8BRE0 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.01■□□□□ 0.63
Rd3Q8BRE0 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rd3Q8BRE0 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Rd3Q8BRE0 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rd3Q8BRE0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rd3Q8BRE0 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rd3Q8BRE0 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.01■□□□□ 0.63
Rd3Q8BRE0 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.01■□□□□ 0.63
Rd3Q8BRE0 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rd3Q8BRE0 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rd3Q8BRE0 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Rd3Q8BRE0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Rd3Q8BRE0 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Rd3Q8BRE0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Rd3Q8BRE0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rd3Q8BRE0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Rd3Q8BRE0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Rd3Q8BRE0 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19■□□□□ 0.63
Rd3Q8BRE0 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rd3Q8BRE0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rd3Q8BRE0 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Rd3Q8BRE0 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19■□□□□ 0.63
Rd3Q8BRE0 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19■□□□□ 0.63
Rd3Q8BRE0 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rd3Q8BRE0 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rd3Q8BRE0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Rd3Q8BRE0 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rd3Q8BRE0 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Rd3Q8BRE0 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rd3Q8BRE0 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rd3Q8BRE0 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rd3Q8BRE0 Gm12085-201ENSMUST00000119263 940 ntBASIC18.99■□□□□ 0.63
Rd3Q8BRE0 Gm7889-201ENSMUST00000185591 958 ntBASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms