Protein–RNA interactions for Protein: Q8BNE1

Tcaf1, TRPM8 channel-associated factor 1, mousemouse

Predictions only

Length 924 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcaf1Q8BNE1 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tcaf1Q8BNE1 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tcaf1Q8BNE1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.35■□□□□ 0.69
Tcaf1Q8BNE1 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tcaf1Q8BNE1 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tcaf1Q8BNE1 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tcaf1Q8BNE1 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Tcaf1Q8BNE1 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tcaf1Q8BNE1 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tcaf1Q8BNE1 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.34■□□□□ 0.69
Tcaf1Q8BNE1 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tcaf1Q8BNE1 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tcaf1Q8BNE1 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tcaf1Q8BNE1 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tcaf1Q8BNE1 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tcaf1Q8BNE1 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tcaf1Q8BNE1 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.34■□□□□ 0.69
Tcaf1Q8BNE1 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tcaf1Q8BNE1 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tcaf1Q8BNE1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Tcaf1Q8BNE1 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tcaf1Q8BNE1 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tcaf1Q8BNE1 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tcaf1Q8BNE1 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tcaf1Q8BNE1 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.33■□□□□ 0.68
Tcaf1Q8BNE1 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.33■□□□□ 0.68
Tcaf1Q8BNE1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Tcaf1Q8BNE1 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tcaf1Q8BNE1 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tcaf1Q8BNE1 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tcaf1Q8BNE1 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Tcaf1Q8BNE1 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tcaf1Q8BNE1 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tcaf1Q8BNE1 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tcaf1Q8BNE1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tcaf1Q8BNE1 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tcaf1Q8BNE1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tcaf1Q8BNE1 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tcaf1Q8BNE1 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tcaf1Q8BNE1 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tcaf1Q8BNE1 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tcaf1Q8BNE1 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tcaf1Q8BNE1 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tcaf1Q8BNE1 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tcaf1Q8BNE1 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.32■□□□□ 0.68
Tcaf1Q8BNE1 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tcaf1Q8BNE1 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tcaf1Q8BNE1 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Tcaf1Q8BNE1 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Tcaf1Q8BNE1 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Tcaf1Q8BNE1 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Tcaf1Q8BNE1 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tcaf1Q8BNE1 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tcaf1Q8BNE1 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Tcaf1Q8BNE1 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tcaf1Q8BNE1 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tcaf1Q8BNE1 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tcaf1Q8BNE1 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tcaf1Q8BNE1 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tcaf1Q8BNE1 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tcaf1Q8BNE1 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tcaf1Q8BNE1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tcaf1Q8BNE1 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Tcaf1Q8BNE1 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.31■□□□□ 0.68
Tcaf1Q8BNE1 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.31■□□□□ 0.68
Tcaf1Q8BNE1 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tcaf1Q8BNE1 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Tcaf1Q8BNE1 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tcaf1Q8BNE1 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tcaf1Q8BNE1 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tcaf1Q8BNE1 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Tcaf1Q8BNE1 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tcaf1Q8BNE1 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tcaf1Q8BNE1 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tcaf1Q8BNE1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tcaf1Q8BNE1 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tcaf1Q8BNE1 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tcaf1Q8BNE1 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tcaf1Q8BNE1 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Tcaf1Q8BNE1 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.3■□□□□ 0.68
Tcaf1Q8BNE1 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.3■□□□□ 0.68
Tcaf1Q8BNE1 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tcaf1Q8BNE1 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tcaf1Q8BNE1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.3■□□□□ 0.68
Tcaf1Q8BNE1 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tcaf1Q8BNE1 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tcaf1Q8BNE1 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tcaf1Q8BNE1 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.29■□□□□ 0.68
Tcaf1Q8BNE1 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tcaf1Q8BNE1 Mir1199-201ENSMUST00000117015 119 ntBASIC19.29■□□□□ 0.68
Tcaf1Q8BNE1 Gm10252-201ENSMUST00000209541 832 ntBASIC19.29■□□□□ 0.68
Tcaf1Q8BNE1 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Tcaf1Q8BNE1 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tcaf1Q8BNE1 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Tcaf1Q8BNE1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Tcaf1Q8BNE1 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tcaf1Q8BNE1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tcaf1Q8BNE1 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tcaf1Q8BNE1 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tcaf1Q8BNE1 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms