Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Prpf18Q8BM39 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.07■□□□□ 0.32
Prpf18Q8BM39 Gm8969-201ENSMUST00000199694 526 ntBASIC17.07■□□□□ 0.32
Prpf18Q8BM39 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf18Q8BM39 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Prpf18Q8BM39 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Prpf18Q8BM39 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf18Q8BM39 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.07■□□□□ 0.32
Prpf18Q8BM39 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf18Q8BM39 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Prpf18Q8BM39 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf18Q8BM39 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf18Q8BM39 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf18Q8BM39 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Prpf18Q8BM39 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Prpf18Q8BM39 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Prpf18Q8BM39 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.06■□□□□ 0.32
Prpf18Q8BM39 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf18Q8BM39 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf18Q8BM39 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf18Q8BM39 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf18Q8BM39 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf18Q8BM39 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.06■□□□□ 0.32
Prpf18Q8BM39 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf18Q8BM39 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf18Q8BM39 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf18Q8BM39 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf18Q8BM39 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.06■□□□□ 0.32
Prpf18Q8BM39 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.06■□□□□ 0.32
Prpf18Q8BM39 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.06■□□□□ 0.32
Prpf18Q8BM39 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Prpf18Q8BM39 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf18Q8BM39 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf18Q8BM39 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf18Q8BM39 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf18Q8BM39 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Prpf18Q8BM39 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf18Q8BM39 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
Prpf18Q8BM39 Gm7860-201ENSMUST00000121190 879 ntBASIC17.05■□□□□ 0.32
Prpf18Q8BM39 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Prpf18Q8BM39 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Prpf18Q8BM39 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf18Q8BM39 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf18Q8BM39 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf18Q8BM39 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf18Q8BM39 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf18Q8BM39 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Prpf18Q8BM39 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Prpf18Q8BM39 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Prpf18Q8BM39 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf18Q8BM39 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf18Q8BM39 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf18Q8BM39 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf18Q8BM39 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf18Q8BM39 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf18Q8BM39 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf18Q8BM39 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf18Q8BM39 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf18Q8BM39 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf18Q8BM39 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.04■□□□□ 0.32
Prpf18Q8BM39 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf18Q8BM39 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Prpf18Q8BM39 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf18Q8BM39 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.04■□□□□ 0.32
Prpf18Q8BM39 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf18Q8BM39 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf18Q8BM39 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf18Q8BM39 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf18Q8BM39 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf18Q8BM39 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf18Q8BM39 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf18Q8BM39 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf18Q8BM39 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf18Q8BM39 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf18Q8BM39 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf18Q8BM39 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf18Q8BM39 Gm43060-201ENSMUST00000200621 289 ntBASIC17.03■□□□□ 0.32
Prpf18Q8BM39 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf18Q8BM39 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf18Q8BM39 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf18Q8BM39 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf18Q8BM39 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf18Q8BM39 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
Prpf18Q8BM39 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf18Q8BM39 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf18Q8BM39 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.02■□□□□ 0.32
Prpf18Q8BM39 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf18Q8BM39 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.02■□□□□ 0.32
Prpf18Q8BM39 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.02■□□□□ 0.32
Prpf18Q8BM39 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf18Q8BM39 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf18Q8BM39 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Prpf18Q8BM39 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Prpf18Q8BM39 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Prpf18Q8BM39 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf18Q8BM39 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.01■□□□□ 0.31
Prpf18Q8BM39 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.01■□□□□ 0.31
Prpf18Q8BM39 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Prpf18Q8BM39 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf18Q8BM39 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms