Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf38Q8BI21 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf38Q8BI21 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Rnf38Q8BI21 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Rnf38Q8BI21 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf38Q8BI21 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf38Q8BI21 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf38Q8BI21 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf38Q8BI21 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Rnf38Q8BI21 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Rnf38Q8BI21 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf38Q8BI21 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.3■□□□□ 0.36
Rnf38Q8BI21 Nespas-201ENSMUST00000143738 1083 ntBASIC17.3■□□□□ 0.36
Rnf38Q8BI21 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.3■□□□□ 0.36
Rnf38Q8BI21 Gm42642-201ENSMUST00000200683 355 ntBASIC17.3■□□□□ 0.36
Rnf38Q8BI21 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Rnf38Q8BI21 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.3■□□□□ 0.36
Rnf38Q8BI21 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Rnf38Q8BI21 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf38Q8BI21 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Rnf38Q8BI21 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf38Q8BI21 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf38Q8BI21 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Rnf38Q8BI21 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf38Q8BI21 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf38Q8BI21 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf38Q8BI21 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf38Q8BI21 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Rnf38Q8BI21 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf38Q8BI21 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.29■□□□□ 0.36
Rnf38Q8BI21 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.29■□□□□ 0.36
Rnf38Q8BI21 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rnf38Q8BI21 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf38Q8BI21 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf38Q8BI21 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Rnf38Q8BI21 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Rnf38Q8BI21 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf38Q8BI21 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf38Q8BI21 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.29■□□□□ 0.36
Rnf38Q8BI21 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf38Q8BI21 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Rnf38Q8BI21 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf38Q8BI21 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf38Q8BI21 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf38Q8BI21 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf38Q8BI21 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf38Q8BI21 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf38Q8BI21 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf38Q8BI21 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf38Q8BI21 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf38Q8BI21 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf38Q8BI21 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Rnf38Q8BI21 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf38Q8BI21 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf38Q8BI21 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf38Q8BI21 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf38Q8BI21 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Rnf38Q8BI21 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf38Q8BI21 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf38Q8BI21 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf38Q8BI21 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf38Q8BI21 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Rnf38Q8BI21 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf38Q8BI21 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.27■□□□□ 0.36
Rnf38Q8BI21 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf38Q8BI21 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.27■□□□□ 0.35
Rnf38Q8BI21 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf38Q8BI21 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf38Q8BI21 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.26■□□□□ 0.35
Rnf38Q8BI21 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf38Q8BI21 Gm18671-201ENSMUST00000214826 683 ntBASIC17.26■□□□□ 0.35
Rnf38Q8BI21 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf38Q8BI21 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf38Q8BI21 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf38Q8BI21 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.26■□□□□ 0.35
Rnf38Q8BI21 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf38Q8BI21 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Rnf38Q8BI21 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf38Q8BI21 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf38Q8BI21 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.25■□□□□ 0.35
Rnf38Q8BI21 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf38Q8BI21 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf38Q8BI21 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf38Q8BI21 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf38Q8BI21 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf38Q8BI21 Gm10033-202ENSMUST00000211874 928 ntBASIC17.25■□□□□ 0.35
Rnf38Q8BI21 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.25■□□□□ 0.35
Rnf38Q8BI21 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf38Q8BI21 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf38Q8BI21 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rnf38Q8BI21 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf38Q8BI21 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf38Q8BI21 Gm22325-201ENSMUST00000158904 308 ntBASIC17.24■□□□□ 0.35
Rnf38Q8BI21 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.24■□□□□ 0.35
Rnf38Q8BI21 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.24■□□□□ 0.35
Rnf38Q8BI21 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.24■□□□□ 0.35
Rnf38Q8BI21 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
Rnf38Q8BI21 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf38Q8BI21 Idnk-204ENSMUST00000226010 1898 ntBASIC17.24■□□□□ 0.35
Rnf38Q8BI21 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms