Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Scn3bQ8BHK2 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn3bQ8BHK2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn3bQ8BHK2 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn3bQ8BHK2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Scn3bQ8BHK2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn3bQ8BHK2 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn3bQ8BHK2 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.72■□□□□ 0.27
Scn3bQ8BHK2 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.72■□□□□ 0.27
Scn3bQ8BHK2 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Scn3bQ8BHK2 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn3bQ8BHK2 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn3bQ8BHK2 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn3bQ8BHK2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn3bQ8BHK2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Scn3bQ8BHK2 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn3bQ8BHK2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn3bQ8BHK2 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn3bQ8BHK2 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.71■□□□□ 0.27
Scn3bQ8BHK2 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn3bQ8BHK2 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn3bQ8BHK2 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn3bQ8BHK2 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn3bQ8BHK2 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Scn3bQ8BHK2 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.71■□□□□ 0.27
Scn3bQ8BHK2 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.71■□□□□ 0.27
Scn3bQ8BHK2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn3bQ8BHK2 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn3bQ8BHK2 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.71■□□□□ 0.27
Scn3bQ8BHK2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Scn3bQ8BHK2 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Scn3bQ8BHK2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Scn3bQ8BHK2 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
Scn3bQ8BHK2 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn3bQ8BHK2 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn3bQ8BHK2 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn3bQ8BHK2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn3bQ8BHK2 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn3bQ8BHK2 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn3bQ8BHK2 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn3bQ8BHK2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn3bQ8BHK2 Gm27801-201ENSMUST00000184174 223 ntBASIC16.7■□□□□ 0.26
Scn3bQ8BHK2 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn3bQ8BHK2 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn3bQ8BHK2 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.7■□□□□ 0.26
Scn3bQ8BHK2 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn3bQ8BHK2 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Scn3bQ8BHK2 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn3bQ8BHK2 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Scn3bQ8BHK2 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn3bQ8BHK2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn3bQ8BHK2 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Scn3bQ8BHK2 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn3bQ8BHK2 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.69■□□□□ 0.26
Scn3bQ8BHK2 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn3bQ8BHK2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn3bQ8BHK2 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn3bQ8BHK2 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn3bQ8BHK2 Gm12922-201ENSMUST00000120626 809 ntBASIC16.69■□□□□ 0.26
Scn3bQ8BHK2 Gm11421-201ENSMUST00000122124 294 ntBASIC16.69■□□□□ 0.26
Scn3bQ8BHK2 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scn3bQ8BHK2 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC16.69■□□□□ 0.26
Scn3bQ8BHK2 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC16.69■□□□□ 0.26
Scn3bQ8BHK2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC16.69■□□□□ 0.26
Scn3bQ8BHK2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Scn3bQ8BHK2 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn3bQ8BHK2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn3bQ8BHK2 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn3bQ8BHK2 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn3bQ8BHK2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Scn3bQ8BHK2 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn3bQ8BHK2 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn3bQ8BHK2 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn3bQ8BHK2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.68■□□□□ 0.26
Scn3bQ8BHK2 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.68■□□□□ 0.26
Scn3bQ8BHK2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Scn3bQ8BHK2 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn3bQ8BHK2 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Scn3bQ8BHK2 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.68■□□□□ 0.26
Scn3bQ8BHK2 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn3bQ8BHK2 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn3bQ8BHK2 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.68■□□□□ 0.26
Scn3bQ8BHK2 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Scn3bQ8BHK2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn3bQ8BHK2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn3bQ8BHK2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn3bQ8BHK2 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn3bQ8BHK2 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.68■□□□□ 0.26
Scn3bQ8BHK2 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn3bQ8BHK2 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Scn3bQ8BHK2 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn3bQ8BHK2 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn3bQ8BHK2 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Scn3bQ8BHK2 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Scn3bQ8BHK2 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn3bQ8BHK2 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn3bQ8BHK2 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn3bQ8BHK2 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn3bQ8BHK2 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn3bQ8BHK2 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms