Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Slc5a7Q8BGY9 Golgb1-201ENSMUST00000023534 498 ntBASIC15.74■□□□□ 0.11
Slc5a7Q8BGY9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Slc5a7Q8BGY9 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Slc5a7Q8BGY9 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Slc5a7Q8BGY9 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Slc5a7Q8BGY9 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Slc5a7Q8BGY9 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Slc5a7Q8BGY9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Slc5a7Q8BGY9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.74■□□□□ 0.11
Slc5a7Q8BGY9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Slc5a7Q8BGY9 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Slc5a7Q8BGY9 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Slc5a7Q8BGY9 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Slc5a7Q8BGY9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Slc5a7Q8BGY9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Slc5a7Q8BGY9 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc5a7Q8BGY9 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc5a7Q8BGY9 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc5a7Q8BGY9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc5a7Q8BGY9 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Slc5a7Q8BGY9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc5a7Q8BGY9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc5a7Q8BGY9 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc5a7Q8BGY9 Gm5576-201ENSMUST00000075809 1236 ntBASIC15.73■□□□□ 0.11
Slc5a7Q8BGY9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Slc5a7Q8BGY9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc5a7Q8BGY9 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc5a7Q8BGY9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc5a7Q8BGY9 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
Slc5a7Q8BGY9 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.73■□□□□ 0.11
Slc5a7Q8BGY9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc5a7Q8BGY9 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Slc5a7Q8BGY9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc5a7Q8BGY9 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc5a7Q8BGY9 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc5a7Q8BGY9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc5a7Q8BGY9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc5a7Q8BGY9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc5a7Q8BGY9 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Slc5a7Q8BGY9 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc5a7Q8BGY9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc5a7Q8BGY9 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc5a7Q8BGY9 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Slc5a7Q8BGY9 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc5a7Q8BGY9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.72■□□□□ 0.11
Slc5a7Q8BGY9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC15.72■□□□□ 0.11
Slc5a7Q8BGY9 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
Slc5a7Q8BGY9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc5a7Q8BGY9 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Slc5a7Q8BGY9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc5a7Q8BGY9 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc5a7Q8BGY9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Slc5a7Q8BGY9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc5a7Q8BGY9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc5a7Q8BGY9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc5a7Q8BGY9 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc5a7Q8BGY9 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Slc5a7Q8BGY9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc5a7Q8BGY9 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc5a7Q8BGY9 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.71■□□□□ 0.11
Slc5a7Q8BGY9 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc5a7Q8BGY9 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Slc5a7Q8BGY9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc5a7Q8BGY9 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc5a7Q8BGY9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Slc5a7Q8BGY9 Gm9207-201ENSMUST00000198773 1115 ntBASIC15.71■□□□□ 0.11
Slc5a7Q8BGY9 Gm9959-201ENSMUST00000068277 390 ntBASIC15.71■□□□□ 0.11
Slc5a7Q8BGY9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Slc5a7Q8BGY9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Slc5a7Q8BGY9 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc5a7Q8BGY9 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc5a7Q8BGY9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc5a7Q8BGY9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Slc5a7Q8BGY9 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Slc5a7Q8BGY9 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Slc5a7Q8BGY9 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.71■□□□□ 0.1
Slc5a7Q8BGY9 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc5a7Q8BGY9 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc5a7Q8BGY9 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc5a7Q8BGY9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc5a7Q8BGY9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.7■□□□□ 0.1
Slc5a7Q8BGY9 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc5a7Q8BGY9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Slc5a7Q8BGY9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc5a7Q8BGY9 Gm7160-202ENSMUST00000188519 1027 ntBASIC15.7■□□□□ 0.1
Slc5a7Q8BGY9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Slc5a7Q8BGY9 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Slc5a7Q8BGY9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Slc5a7Q8BGY9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC15.7■□□□□ 0.1
Slc5a7Q8BGY9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Slc5a7Q8BGY9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc5a7Q8BGY9 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Slc5a7Q8BGY9 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc5a7Q8BGY9 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.7■□□□□ 0.1
Slc5a7Q8BGY9 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Slc5a7Q8BGY9 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc5a7Q8BGY9 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc5a7Q8BGY9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc5a7Q8BGY9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms