Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.07■□□□□ 0.64
Trim6Q8BGE7 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.07■□□□□ 0.64
Trim6Q8BGE7 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim6Q8BGE7 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Trim6Q8BGE7 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.07■□□□□ 0.64
Trim6Q8BGE7 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim6Q8BGE7 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim6Q8BGE7 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Trim6Q8BGE7 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Trim6Q8BGE7 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim6Q8BGE7 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim6Q8BGE7 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim6Q8BGE7 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.07■□□□□ 0.64
Trim6Q8BGE7 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim6Q8BGE7 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim6Q8BGE7 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Trim6Q8BGE7 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim6Q8BGE7 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trim6Q8BGE7 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim6Q8BGE7 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim6Q8BGE7 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim6Q8BGE7 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trim6Q8BGE7 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.06■□□□□ 0.64
Trim6Q8BGE7 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim6Q8BGE7 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trim6Q8BGE7 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim6Q8BGE7 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.06■□□□□ 0.64
Trim6Q8BGE7 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.06■□□□□ 0.64
Trim6Q8BGE7 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim6Q8BGE7 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim6Q8BGE7 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim6Q8BGE7 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim6Q8BGE7 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim6Q8BGE7 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim6Q8BGE7 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim6Q8BGE7 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.05■□□□□ 0.64
Trim6Q8BGE7 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim6Q8BGE7 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim6Q8BGE7 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Trim6Q8BGE7 Gm43060-201ENSMUST00000200621 289 ntBASIC19.05■□□□□ 0.64
Trim6Q8BGE7 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim6Q8BGE7 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim6Q8BGE7 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Trim6Q8BGE7 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim6Q8BGE7 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim6Q8BGE7 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim6Q8BGE7 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim6Q8BGE7 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim6Q8BGE7 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim6Q8BGE7 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim6Q8BGE7 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim6Q8BGE7 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim6Q8BGE7 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
Trim6Q8BGE7 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim6Q8BGE7 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Trim6Q8BGE7 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim6Q8BGE7 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.04■□□□□ 0.64
Trim6Q8BGE7 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim6Q8BGE7 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.04■□□□□ 0.64
Trim6Q8BGE7 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.04■□□□□ 0.64
Trim6Q8BGE7 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim6Q8BGE7 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim6Q8BGE7 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim6Q8BGE7 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim6Q8BGE7 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim6Q8BGE7 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.04■□□□□ 0.64
Trim6Q8BGE7 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim6Q8BGE7 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim6Q8BGE7 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim6Q8BGE7 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim6Q8BGE7 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Trim6Q8BGE7 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim6Q8BGE7 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Trim6Q8BGE7 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim6Q8BGE7 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim6Q8BGE7 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim6Q8BGE7 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.03■□□□□ 0.64
Trim6Q8BGE7 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim6Q8BGE7 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.03■□□□□ 0.64
Trim6Q8BGE7 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim6Q8BGE7 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Trim6Q8BGE7 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim6Q8BGE7 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim6Q8BGE7 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim6Q8BGE7 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim6Q8BGE7 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim6Q8BGE7 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trim6Q8BGE7 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Trim6Q8BGE7 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trim6Q8BGE7 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim6Q8BGE7 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.02■□□□□ 0.64
Trim6Q8BGE7 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trim6Q8BGE7 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.02■□□□□ 0.64
Trim6Q8BGE7 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Trim6Q8BGE7 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Trim6Q8BGE7 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trim6Q8BGE7 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
Trim6Q8BGE7 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim6Q8BGE7 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim6Q8BGE7 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms