Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vrk1Q80X41 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vrk1Q80X41 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vrk1Q80X41 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vrk1Q80X41 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vrk1Q80X41 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vrk1Q80X41 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vrk1Q80X41 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vrk1Q80X41 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Vrk1Q80X41 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.09■□□□□ 0.33
Vrk1Q80X41 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vrk1Q80X41 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vrk1Q80X41 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.09■□□□□ 0.33
Vrk1Q80X41 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Vrk1Q80X41 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.09■□□□□ 0.33
Vrk1Q80X41 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vrk1Q80X41 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vrk1Q80X41 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Vrk1Q80X41 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vrk1Q80X41 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vrk1Q80X41 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.08■□□□□ 0.33
Vrk1Q80X41 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.08■□□□□ 0.33
Vrk1Q80X41 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vrk1Q80X41 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vrk1Q80X41 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Vrk1Q80X41 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.08■□□□□ 0.33
Vrk1Q80X41 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vrk1Q80X41 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.08■□□□□ 0.32
Vrk1Q80X41 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vrk1Q80X41 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.08■□□□□ 0.32
Vrk1Q80X41 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Vrk1Q80X41 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.08■□□□□ 0.32
Vrk1Q80X41 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Vrk1Q80X41 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vrk1Q80X41 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Vrk1Q80X41 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Vrk1Q80X41 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Vrk1Q80X41 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vrk1Q80X41 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vrk1Q80X41 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vrk1Q80X41 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.07■□□□□ 0.32
Vrk1Q80X41 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vrk1Q80X41 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vrk1Q80X41 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vrk1Q80X41 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Vrk1Q80X41 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vrk1Q80X41 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vrk1Q80X41 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.07■□□□□ 0.32
Vrk1Q80X41 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.07■□□□□ 0.32
Vrk1Q80X41 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vrk1Q80X41 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vrk1Q80X41 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Vrk1Q80X41 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vrk1Q80X41 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vrk1Q80X41 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vrk1Q80X41 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vrk1Q80X41 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.06■□□□□ 0.32
Vrk1Q80X41 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vrk1Q80X41 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vrk1Q80X41 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Vrk1Q80X41 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vrk1Q80X41 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vrk1Q80X41 Gm13559-201ENSMUST00000120476 863 ntBASIC17.06■□□□□ 0.32
Vrk1Q80X41 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.06■□□□□ 0.32
Vrk1Q80X41 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Vrk1Q80X41 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vrk1Q80X41 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Vrk1Q80X41 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vrk1Q80X41 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Vrk1Q80X41 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vrk1Q80X41 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Vrk1Q80X41 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vrk1Q80X41 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vrk1Q80X41 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vrk1Q80X41 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vrk1Q80X41 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Vrk1Q80X41 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vrk1Q80X41 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vrk1Q80X41 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vrk1Q80X41 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vrk1Q80X41 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vrk1Q80X41 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vrk1Q80X41 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Vrk1Q80X41 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vrk1Q80X41 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Vrk1Q80X41 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vrk1Q80X41 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vrk1Q80X41 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vrk1Q80X41 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vrk1Q80X41 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.05■□□□□ 0.32
Vrk1Q80X41 Gm3375-201ENSMUST00000203929 796 ntBASIC17.05■□□□□ 0.32
Vrk1Q80X41 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.05■□□□□ 0.32
Vrk1Q80X41 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.05■□□□□ 0.32
Vrk1Q80X41 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vrk1Q80X41 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vrk1Q80X41 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.05■□□□□ 0.32
Vrk1Q80X41 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vrk1Q80X41 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vrk1Q80X41 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vrk1Q80X41 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms