Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.33■□□□□ 0.36
Trim36Q80WG7 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim36Q80WG7 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.33■□□□□ 0.36
Trim36Q80WG7 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim36Q80WG7 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Trim36Q80WG7 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Trim36Q80WG7 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim36Q80WG7 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.33■□□□□ 0.36
Trim36Q80WG7 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Trim36Q80WG7 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim36Q80WG7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim36Q80WG7 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim36Q80WG7 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim36Q80WG7 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim36Q80WG7 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Trim36Q80WG7 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trim36Q80WG7 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim36Q80WG7 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.32■□□□□ 0.36
Trim36Q80WG7 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Trim36Q80WG7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim36Q80WG7 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim36Q80WG7 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim36Q80WG7 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim36Q80WG7 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim36Q80WG7 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim36Q80WG7 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim36Q80WG7 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim36Q80WG7 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim36Q80WG7 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim36Q80WG7 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim36Q80WG7 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim36Q80WG7 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim36Q80WG7 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trim36Q80WG7 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim36Q80WG7 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim36Q80WG7 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim36Q80WG7 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim36Q80WG7 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim36Q80WG7 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim36Q80WG7 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim36Q80WG7 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim36Q80WG7 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim36Q80WG7 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim36Q80WG7 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim36Q80WG7 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim36Q80WG7 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim36Q80WG7 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Trim36Q80WG7 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim36Q80WG7 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trim36Q80WG7 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim36Q80WG7 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim36Q80WG7 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.3■□□□□ 0.36
Trim36Q80WG7 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.3■□□□□ 0.36
Trim36Q80WG7 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim36Q80WG7 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim36Q80WG7 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Trim36Q80WG7 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim36Q80WG7 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim36Q80WG7 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim36Q80WG7 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim36Q80WG7 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim36Q80WG7 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.3■□□□□ 0.36
Trim36Q80WG7 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim36Q80WG7 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Trim36Q80WG7 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim36Q80WG7 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim36Q80WG7 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim36Q80WG7 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim36Q80WG7 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trim36Q80WG7 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim36Q80WG7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.29■□□□□ 0.36
Trim36Q80WG7 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim36Q80WG7 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trim36Q80WG7 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trim36Q80WG7 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trim36Q80WG7 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim36Q80WG7 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim36Q80WG7 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim36Q80WG7 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trim36Q80WG7 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim36Q80WG7 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trim36Q80WG7 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim36Q80WG7 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Trim36Q80WG7 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim36Q80WG7 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Trim36Q80WG7 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim36Q80WG7 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim36Q80WG7 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trim36Q80WG7 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim36Q80WG7 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim36Q80WG7 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
Trim36Q80WG7 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim36Q80WG7 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim36Q80WG7 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.28■□□□□ 0.36
Trim36Q80WG7 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.28■□□□□ 0.36
Trim36Q80WG7 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.28■□□□□ 0.36
Trim36Q80WG7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trim36Q80WG7 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim36Q80WG7 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.28■□□□□ 0.36
Trim36Q80WG7 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms