Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Prpf40bQ80W14 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.67■□□□□ 0.9
Prpf40bQ80W14 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Prpf40bQ80W14 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prpf40bQ80W14 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC20.67■□□□□ 0.9
Prpf40bQ80W14 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prpf40bQ80W14 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
Prpf40bQ80W14 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prpf40bQ80W14 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prpf40bQ80W14 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Prpf40bQ80W14 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prpf40bQ80W14 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prpf40bQ80W14 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Prpf40bQ80W14 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prpf40bQ80W14 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prpf40bQ80W14 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prpf40bQ80W14 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prpf40bQ80W14 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prpf40bQ80W14 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prpf40bQ80W14 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prpf40bQ80W14 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prpf40bQ80W14 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prpf40bQ80W14 Gm11927-201ENSMUST00000118472 759 ntBASIC20.66■□□□□ 0.9
Prpf40bQ80W14 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.66■□□□□ 0.9
Prpf40bQ80W14 Gm7889-201ENSMUST00000185591 958 ntBASIC20.66■□□□□ 0.9
Prpf40bQ80W14 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Prpf40bQ80W14 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prpf40bQ80W14 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prpf40bQ80W14 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prpf40bQ80W14 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prpf40bQ80W14 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prpf40bQ80W14 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prpf40bQ80W14 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.66■□□□□ 0.9
Prpf40bQ80W14 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.66■□□□□ 0.9
Prpf40bQ80W14 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prpf40bQ80W14 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC20.65■□□□□ 0.9
Prpf40bQ80W14 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prpf40bQ80W14 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Prpf40bQ80W14 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Prpf40bQ80W14 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prpf40bQ80W14 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prpf40bQ80W14 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prpf40bQ80W14 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Prpf40bQ80W14 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Prpf40bQ80W14 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Prpf40bQ80W14 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Prpf40bQ80W14 Flg-201ENSMUST00000050758 1488 ntBASIC20.64■□□□□ 0.89
Prpf40bQ80W14 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Prpf40bQ80W14 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Prpf40bQ80W14 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Prpf40bQ80W14 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Prpf40bQ80W14 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.64■□□□□ 0.89
Prpf40bQ80W14 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Prpf40bQ80W14 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.64■□□□□ 0.89
Prpf40bQ80W14 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
Prpf40bQ80W14 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Prpf40bQ80W14 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Prpf40bQ80W14 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Prpf40bQ80W14 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Prpf40bQ80W14 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prpf40bQ80W14 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Prpf40bQ80W14 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prpf40bQ80W14 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prpf40bQ80W14 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Prpf40bQ80W14 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.63■□□□□ 0.89
Prpf40bQ80W14 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prpf40bQ80W14 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Prpf40bQ80W14 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Prpf40bQ80W14 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prpf40bQ80W14 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prpf40bQ80W14 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Prpf40bQ80W14 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prpf40bQ80W14 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prpf40bQ80W14 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Prpf40bQ80W14 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Prpf40bQ80W14 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Prpf40bQ80W14 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prpf40bQ80W14 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC20.62■□□□□ 0.89
Prpf40bQ80W14 Gm43183-201ENSMUST00000200632 547 ntBASIC20.62■□□□□ 0.89
Prpf40bQ80W14 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.62■□□□□ 0.89
Prpf40bQ80W14 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prpf40bQ80W14 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC20.62■□□□□ 0.89
Prpf40bQ80W14 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Prpf40bQ80W14 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prpf40bQ80W14 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Prpf40bQ80W14 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prpf40bQ80W14 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Prpf40bQ80W14 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Prpf40bQ80W14 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Prpf40bQ80W14 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC20.61■□□□□ 0.89
Prpf40bQ80W14 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.61■□□□□ 0.89
Prpf40bQ80W14 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.61■□□□□ 0.89
Prpf40bQ80W14 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prpf40bQ80W14 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC20.61■□□□□ 0.89
Prpf40bQ80W14 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prpf40bQ80W14 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prpf40bQ80W14 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prpf40bQ80W14 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prpf40bQ80W14 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.61■□□□□ 0.89
Prpf40bQ80W14 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms