Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh8Q7TSK3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdh8Q7TSK3 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdh8Q7TSK3 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh8Q7TSK3 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh8Q7TSK3 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh8Q7TSK3 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Pcdh8Q7TSK3 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh8Q7TSK3 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Pcdh8Q7TSK3 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh8Q7TSK3 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh8Q7TSK3 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh8Q7TSK3 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.7■□□□□ 0.42
Pcdh8Q7TSK3 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh8Q7TSK3 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh8Q7TSK3 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.69■□□□□ 0.42
Pcdh8Q7TSK3 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Pcdh8Q7TSK3 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.69■□□□□ 0.42
Pcdh8Q7TSK3 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh8Q7TSK3 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Pcdh8Q7TSK3 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh8Q7TSK3 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Pcdh8Q7TSK3 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.69■□□□□ 0.42
Pcdh8Q7TSK3 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Pcdh8Q7TSK3 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh8Q7TSK3 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh8Q7TSK3 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh8Q7TSK3 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh8Q7TSK3 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh8Q7TSK3 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh8Q7TSK3 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Pcdh8Q7TSK3 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdh8Q7TSK3 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh8Q7TSK3 Mir1199-201ENSMUST00000117015 119 ntBASIC17.68■□□□□ 0.42
Pcdh8Q7TSK3 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh8Q7TSK3 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdh8Q7TSK3 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.68■□□□□ 0.42
Pcdh8Q7TSK3 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Pcdh8Q7TSK3 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdh8Q7TSK3 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh8Q7TSK3 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh8Q7TSK3 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Pcdh8Q7TSK3 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh8Q7TSK3 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh8Q7TSK3 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh8Q7TSK3 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Pcdh8Q7TSK3 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh8Q7TSK3 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh8Q7TSK3 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh8Q7TSK3 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh8Q7TSK3 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh8Q7TSK3 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.67■□□□□ 0.42
Pcdh8Q7TSK3 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh8Q7TSK3 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh8Q7TSK3 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh8Q7TSK3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh8Q7TSK3 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Pcdh8Q7TSK3 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Pcdh8Q7TSK3 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.67■□□□□ 0.42
Pcdh8Q7TSK3 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.67■□□□□ 0.42
Pcdh8Q7TSK3 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh8Q7TSK3 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh8Q7TSK3 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh8Q7TSK3 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh8Q7TSK3 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh8Q7TSK3 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh8Q7TSK3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh8Q7TSK3 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh8Q7TSK3 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh8Q7TSK3 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh8Q7TSK3 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh8Q7TSK3 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh8Q7TSK3 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh8Q7TSK3 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh8Q7TSK3 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh8Q7TSK3 Gm10138-203ENSMUST00000206952 366 ntBASIC17.66■□□□□ 0.42
Pcdh8Q7TSK3 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.66■□□□□ 0.42
Pcdh8Q7TSK3 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.66■□□□□ 0.42
Pcdh8Q7TSK3 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh8Q7TSK3 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Pcdh8Q7TSK3 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh8Q7TSK3 Grk6-206ENSMUST00000224995 2971 ntBASIC17.66■□□□□ 0.42
Pcdh8Q7TSK3 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.66■□□□□ 0.42
Pcdh8Q7TSK3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh8Q7TSK3 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Pcdh8Q7TSK3 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Pcdh8Q7TSK3 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh8Q7TSK3 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh8Q7TSK3 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Pcdh8Q7TSK3 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Pcdh8Q7TSK3 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh8Q7TSK3 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh8Q7TSK3 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh8Q7TSK3 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh8Q7TSK3 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh8Q7TSK3 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.65■□□□□ 0.42
Pcdh8Q7TSK3 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh8Q7TSK3 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.65■□□□□ 0.42
Pcdh8Q7TSK3 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh8Q7TSK3 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms