Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Sh3d21Q7TSG5 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.64■□□□□ 0.73
Sh3d21Q7TSG5 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.64■□□□□ 0.73
Sh3d21Q7TSG5 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sh3d21Q7TSG5 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sh3d21Q7TSG5 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sh3d21Q7TSG5 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sh3d21Q7TSG5 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Sh3d21Q7TSG5 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sh3d21Q7TSG5 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sh3d21Q7TSG5 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sh3d21Q7TSG5 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3d21Q7TSG5 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3d21Q7TSG5 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3d21Q7TSG5 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3d21Q7TSG5 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3d21Q7TSG5 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3d21Q7TSG5 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3d21Q7TSG5 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Sh3d21Q7TSG5 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3d21Q7TSG5 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Sh3d21Q7TSG5 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3d21Q7TSG5 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.63■□□□□ 0.73
Sh3d21Q7TSG5 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3d21Q7TSG5 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3d21Q7TSG5 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3d21Q7TSG5 Gm2399-201ENSMUST00000104944 225 ntBASIC19.63■□□□□ 0.73
Sh3d21Q7TSG5 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Sh3d21Q7TSG5 Gm44549-201ENSMUST00000208351 577 ntBASIC19.63■□□□□ 0.73
Sh3d21Q7TSG5 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3d21Q7TSG5 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3d21Q7TSG5 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3d21Q7TSG5 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Sh3d21Q7TSG5 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3d21Q7TSG5 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3d21Q7TSG5 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Sh3d21Q7TSG5 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3d21Q7TSG5 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3d21Q7TSG5 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3d21Q7TSG5 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3d21Q7TSG5 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.62■□□□□ 0.73
Sh3d21Q7TSG5 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3d21Q7TSG5 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3d21Q7TSG5 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.62■□□□□ 0.73
Sh3d21Q7TSG5 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.62■□□□□ 0.73
Sh3d21Q7TSG5 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3d21Q7TSG5 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Sh3d21Q7TSG5 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3d21Q7TSG5 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3d21Q7TSG5 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3d21Q7TSG5 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3d21Q7TSG5 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sh3d21Q7TSG5 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sh3d21Q7TSG5 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Sh3d21Q7TSG5 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sh3d21Q7TSG5 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sh3d21Q7TSG5 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sh3d21Q7TSG5 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Sh3d21Q7TSG5 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Sh3d21Q7TSG5 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sh3d21Q7TSG5 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sh3d21Q7TSG5 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sh3d21Q7TSG5 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sh3d21Q7TSG5 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Sh3d21Q7TSG5 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sh3d21Q7TSG5 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Sh3d21Q7TSG5 Tgds-204ENSMUST00000228543 1594 ntBASIC19.61■□□□□ 0.73
Sh3d21Q7TSG5 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sh3d21Q7TSG5 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sh3d21Q7TSG5 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sh3d21Q7TSG5 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sh3d21Q7TSG5 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sh3d21Q7TSG5 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sh3d21Q7TSG5 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sh3d21Q7TSG5 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sh3d21Q7TSG5 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sh3d21Q7TSG5 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sh3d21Q7TSG5 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sh3d21Q7TSG5 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.6■□□□□ 0.73
Sh3d21Q7TSG5 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Sh3d21Q7TSG5 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sh3d21Q7TSG5 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sh3d21Q7TSG5 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sh3d21Q7TSG5 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sh3d21Q7TSG5 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sh3d21Q7TSG5 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.6■□□□□ 0.73
Sh3d21Q7TSG5 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Sh3d21Q7TSG5 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3d21Q7TSG5 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.59■□□□□ 0.73
Sh3d21Q7TSG5 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3d21Q7TSG5 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3d21Q7TSG5 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.59■□□□□ 0.73
Sh3d21Q7TSG5 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3d21Q7TSG5 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3d21Q7TSG5 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3d21Q7TSG5 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.59■□□□□ 0.73
Sh3d21Q7TSG5 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Sh3d21Q7TSG5 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3d21Q7TSG5 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Sh3d21Q7TSG5 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms