Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.46■□□□□ 0.39
Ubfd1Q78JW9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.46■□□□□ 0.39
Ubfd1Q78JW9 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.46■□□□□ 0.39
Ubfd1Q78JW9 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.46■□□□□ 0.39
Ubfd1Q78JW9 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ubfd1Q78JW9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ubfd1Q78JW9 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ubfd1Q78JW9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ubfd1Q78JW9 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Ubfd1Q78JW9 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubfd1Q78JW9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubfd1Q78JW9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubfd1Q78JW9 Tgds-204ENSMUST00000228543 1594 ntBASIC17.45■□□□□ 0.38
Ubfd1Q78JW9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubfd1Q78JW9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubfd1Q78JW9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubfd1Q78JW9 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ubfd1Q78JW9 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubfd1Q78JW9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubfd1Q78JW9 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Ubfd1Q78JW9 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubfd1Q78JW9 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ubfd1Q78JW9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubfd1Q78JW9 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ubfd1Q78JW9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ubfd1Q78JW9 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubfd1Q78JW9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubfd1Q78JW9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubfd1Q78JW9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Ubfd1Q78JW9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ubfd1Q78JW9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ubfd1Q78JW9 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubfd1Q78JW9 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ubfd1Q78JW9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubfd1Q78JW9 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubfd1Q78JW9 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.44■□□□□ 0.38
Ubfd1Q78JW9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ubfd1Q78JW9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ubfd1Q78JW9 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ubfd1Q78JW9 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.44■□□□□ 0.38
Ubfd1Q78JW9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubfd1Q78JW9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.44■□□□□ 0.38
Ubfd1Q78JW9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ubfd1Q78JW9 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubfd1Q78JW9 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubfd1Q78JW9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
Ubfd1Q78JW9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ubfd1Q78JW9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ubfd1Q78JW9 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ubfd1Q78JW9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ubfd1Q78JW9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ubfd1Q78JW9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ubfd1Q78JW9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ubfd1Q78JW9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ubfd1Q78JW9 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Ubfd1Q78JW9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.43■□□□□ 0.38
Ubfd1Q78JW9 Gm21814-202ENSMUST00000203277 873 ntBASIC17.43■□□□□ 0.38
Ubfd1Q78JW9 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ubfd1Q78JW9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ubfd1Q78JW9 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ubfd1Q78JW9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ubfd1Q78JW9 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ubfd1Q78JW9 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ubfd1Q78JW9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ubfd1Q78JW9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.43■□□□□ 0.38
Ubfd1Q78JW9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Ubfd1Q78JW9 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubfd1Q78JW9 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.42■□□□□ 0.38
Ubfd1Q78JW9 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubfd1Q78JW9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubfd1Q78JW9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ubfd1Q78JW9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubfd1Q78JW9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubfd1Q78JW9 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubfd1Q78JW9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubfd1Q78JW9 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.42■□□□□ 0.38
Ubfd1Q78JW9 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubfd1Q78JW9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubfd1Q78JW9 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Ubfd1Q78JW9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.42■□□□□ 0.38
Ubfd1Q78JW9 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.42■□□□□ 0.38
Ubfd1Q78JW9 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubfd1Q78JW9 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubfd1Q78JW9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubfd1Q78JW9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Ubfd1Q78JW9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.42■□□□□ 0.38
Ubfd1Q78JW9 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.42■□□□□ 0.38
Ubfd1Q78JW9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubfd1Q78JW9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.42■□□□□ 0.38
Ubfd1Q78JW9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ubfd1Q78JW9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ubfd1Q78JW9 Gm10418-201ENSMUST00000100943 576 ntBASIC17.41■□□□□ 0.38
Ubfd1Q78JW9 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Ubfd1Q78JW9 Timm23-208ENSMUST00000226683 750 ntBASIC17.41■□□□□ 0.38
Ubfd1Q78JW9 Odf3b-204ENSMUST00000227834 930 ntBASIC17.41■□□□□ 0.38
Ubfd1Q78JW9 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ubfd1Q78JW9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ubfd1Q78JW9 Gm5417-201ENSMUST00000079706 384 ntBASIC17.41■□□□□ 0.38
Ubfd1Q78JW9 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Ubfd1Q78JW9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms