Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Npc1l1Q6T3U4 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Npc1l1Q6T3U4 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Npc1l1Q6T3U4 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Npc1l1Q6T3U4 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC21.55■■□□□ 1.04
Npc1l1Q6T3U4 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC21.55■■□□□ 1.04
Npc1l1Q6T3U4 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Npc1l1Q6T3U4 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
Npc1l1Q6T3U4 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Npc1l1Q6T3U4 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Npc1l1Q6T3U4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Npc1l1Q6T3U4 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Npc1l1Q6T3U4 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
Npc1l1Q6T3U4 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC21.55■■□□□ 1.04
Npc1l1Q6T3U4 Mir2861-201ENSMUST00000175539 82 ntBASIC21.55■■□□□ 1.04
Npc1l1Q6T3U4 Gm43799-201ENSMUST00000201845 579 ntBASIC21.55■■□□□ 1.04
Npc1l1Q6T3U4 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC21.55■■□□□ 1.04
Npc1l1Q6T3U4 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC21.55■■□□□ 1.04
Npc1l1Q6T3U4 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Npc1l1Q6T3U4 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Npc1l1Q6T3U4 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Npc1l1Q6T3U4 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC21.54■■□□□ 1.04
Npc1l1Q6T3U4 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Npc1l1Q6T3U4 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC21.54■■□□□ 1.04
Npc1l1Q6T3U4 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Npc1l1Q6T3U4 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Npc1l1Q6T3U4 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Npc1l1Q6T3U4 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Npc1l1Q6T3U4 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
Npc1l1Q6T3U4 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Npc1l1Q6T3U4 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Npc1l1Q6T3U4 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
Npc1l1Q6T3U4 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC21.53■■□□□ 1.04
Npc1l1Q6T3U4 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Npc1l1Q6T3U4 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Npc1l1Q6T3U4 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Npc1l1Q6T3U4 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Npc1l1Q6T3U4 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Npc1l1Q6T3U4 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Npc1l1Q6T3U4 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Npc1l1Q6T3U4 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.03
Npc1l1Q6T3U4 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Npc1l1Q6T3U4 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
Npc1l1Q6T3U4 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Npc1l1Q6T3U4 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Npc1l1Q6T3U4 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.51■■□□□ 1.03
Npc1l1Q6T3U4 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Npc1l1Q6T3U4 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Npc1l1Q6T3U4 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
Npc1l1Q6T3U4 Gm10231-201ENSMUST00000181584 441 ntBASIC21.51■■□□□ 1.03
Npc1l1Q6T3U4 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Npc1l1Q6T3U4 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC21.51■■□□□ 1.03
Npc1l1Q6T3U4 Gm10175-202ENSMUST00000208752 441 ntBASIC21.51■■□□□ 1.03
Npc1l1Q6T3U4 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Npc1l1Q6T3U4 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Npc1l1Q6T3U4 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Npc1l1Q6T3U4 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Npc1l1Q6T3U4 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Npc1l1Q6T3U4 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Npc1l1Q6T3U4 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Npc1l1Q6T3U4 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Npc1l1Q6T3U4 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Npc1l1Q6T3U4 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Npc1l1Q6T3U4 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Npc1l1Q6T3U4 Gm6433-201ENSMUST00000118634 875 ntBASIC21.5■■□□□ 1.03
Npc1l1Q6T3U4 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
Npc1l1Q6T3U4 Gm43183-201ENSMUST00000200632 547 ntBASIC21.5■■□□□ 1.03
Npc1l1Q6T3U4 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Npc1l1Q6T3U4 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Npc1l1Q6T3U4 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Npc1l1Q6T3U4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Npc1l1Q6T3U4 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Npc1l1Q6T3U4 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Npc1l1Q6T3U4 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Npc1l1Q6T3U4 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Npc1l1Q6T3U4 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Npc1l1Q6T3U4 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Npc1l1Q6T3U4 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC21.49■■□□□ 1.03
Npc1l1Q6T3U4 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Npc1l1Q6T3U4 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Npc1l1Q6T3U4 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Npc1l1Q6T3U4 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Npc1l1Q6T3U4 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Npc1l1Q6T3U4 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Npc1l1Q6T3U4 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Npc1l1Q6T3U4 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Npc1l1Q6T3U4 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Npc1l1Q6T3U4 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC21.48■■□□□ 1.03
Npc1l1Q6T3U4 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Npc1l1Q6T3U4 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Npc1l1Q6T3U4 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC21.48■■□□□ 1.03
Npc1l1Q6T3U4 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Npc1l1Q6T3U4 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Npc1l1Q6T3U4 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Npc1l1Q6T3U4 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Npc1l1Q6T3U4 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Npc1l1Q6T3U4 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Npc1l1Q6T3U4 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC21.48■■□□□ 1.03
Npc1l1Q6T3U4 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Npc1l1Q6T3U4 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms