Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Abcf1Q6P542 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Abcf1Q6P542 Gm13146-201ENSMUST00000118508 780 ntBASIC20.06■□□□□ 0.8
Abcf1Q6P542 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.06■□□□□ 0.8
Abcf1Q6P542 Gm44487-201ENSMUST00000205145 325 ntBASIC20.06■□□□□ 0.8
Abcf1Q6P542 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.06■□□□□ 0.8
Abcf1Q6P542 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Abcf1Q6P542 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Abcf1Q6P542 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Abcf1Q6P542 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Abcf1Q6P542 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Abcf1Q6P542 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Abcf1Q6P542 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Abcf1Q6P542 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Abcf1Q6P542 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Abcf1Q6P542 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Abcf1Q6P542 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Abcf1Q6P542 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Abcf1Q6P542 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Abcf1Q6P542 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.05■□□□□ 0.8
Abcf1Q6P542 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.05■□□□□ 0.8
Abcf1Q6P542 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Abcf1Q6P542 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Abcf1Q6P542 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Abcf1Q6P542 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Abcf1Q6P542 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Abcf1Q6P542 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Abcf1Q6P542 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Abcf1Q6P542 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Abcf1Q6P542 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.04■□□□□ 0.8
Abcf1Q6P542 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Abcf1Q6P542 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Abcf1Q6P542 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Abcf1Q6P542 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Abcf1Q6P542 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Abcf1Q6P542 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.04■□□□□ 0.8
Abcf1Q6P542 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Abcf1Q6P542 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Abcf1Q6P542 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.04■□□□□ 0.8
Abcf1Q6P542 Gm37179-201ENSMUST00000194862 823 ntBASIC20.04■□□□□ 0.8
Abcf1Q6P542 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Abcf1Q6P542 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.04■□□□□ 0.8
Abcf1Q6P542 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Abcf1Q6P542 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Abcf1Q6P542 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Abcf1Q6P542 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Abcf1Q6P542 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Abcf1Q6P542 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Abcf1Q6P542 Shroom3-211ENSMUST00000225438 5742 ntBASIC20.03■□□□□ 0.8
Abcf1Q6P542 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
Abcf1Q6P542 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Abcf1Q6P542 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
Abcf1Q6P542 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.03■□□□□ 0.8
Abcf1Q6P542 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Abcf1Q6P542 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Abcf1Q6P542 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Abcf1Q6P542 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Abcf1Q6P542 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Abcf1Q6P542 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Abcf1Q6P542 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Abcf1Q6P542 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Abcf1Q6P542 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Abcf1Q6P542 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Abcf1Q6P542 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Abcf1Q6P542 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC20.02■□□□□ 0.8
Abcf1Q6P542 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Abcf1Q6P542 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.02■□□□□ 0.8
Abcf1Q6P542 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.02■□□□□ 0.8
Abcf1Q6P542 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.02■□□□□ 0.8
Abcf1Q6P542 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Abcf1Q6P542 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Abcf1Q6P542 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Abcf1Q6P542 Tgds-204ENSMUST00000228543 1594 ntBASIC20.02■□□□□ 0.8
Abcf1Q6P542 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Abcf1Q6P542 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Abcf1Q6P542 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.02■□□□□ 0.79
Abcf1Q6P542 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Abcf1Q6P542 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Abcf1Q6P542 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Abcf1Q6P542 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Abcf1Q6P542 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Abcf1Q6P542 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
Abcf1Q6P542 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Abcf1Q6P542 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Abcf1Q6P542 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.01■□□□□ 0.79
Abcf1Q6P542 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.01■□□□□ 0.79
Abcf1Q6P542 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Abcf1Q6P542 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Abcf1Q6P542 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Abcf1Q6P542 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Abcf1Q6P542 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Abcf1Q6P542 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Abcf1Q6P542 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Abcf1Q6P542 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Abcf1Q6P542 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Abcf1Q6P542 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Abcf1Q6P542 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Abcf1Q6P542 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.01■□□□□ 0.79
Abcf1Q6P542 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20■□□□□ 0.79
Abcf1Q6P542 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms