Protein–RNA interactions for Protein: Q64287

Irf4, Interferon regulatory factor 4, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf4Q64287 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Irf4Q64287 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.6■□□□□ 0.41
Irf4Q64287 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Irf4Q64287 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Irf4Q64287 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Irf4Q64287 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Irf4Q64287 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Irf4Q64287 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Irf4Q64287 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Irf4Q64287 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.59■□□□□ 0.41
Irf4Q64287 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Irf4Q64287 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Irf4Q64287 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Irf4Q64287 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Irf4Q64287 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Irf4Q64287 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Irf4Q64287 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Irf4Q64287 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.59■□□□□ 0.41
Irf4Q64287 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.59■□□□□ 0.41
Irf4Q64287 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.59■□□□□ 0.41
Irf4Q64287 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Irf4Q64287 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Irf4Q64287 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Irf4Q64287 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Irf4Q64287 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Irf4Q64287 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Irf4Q64287 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Irf4Q64287 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Irf4Q64287 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Irf4Q64287 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Irf4Q64287 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.58■□□□□ 0.41
Irf4Q64287 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Irf4Q64287 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Irf4Q64287 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Irf4Q64287 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.58■□□□□ 0.4
Irf4Q64287 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Irf4Q64287 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Irf4Q64287 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Irf4Q64287 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Irf4Q64287 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Irf4Q64287 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Irf4Q64287 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Irf4Q64287 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Irf4Q64287 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Irf4Q64287 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Irf4Q64287 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Irf4Q64287 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Irf4Q64287 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Irf4Q64287 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Irf4Q64287 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Irf4Q64287 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Irf4Q64287 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Irf4Q64287 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Irf4Q64287 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Irf4Q64287 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Irf4Q64287 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Irf4Q64287 Mir7071-201ENSMUST00000184847 69 ntBASIC17.57■□□□□ 0.4
Irf4Q64287 Gm37055-201ENSMUST00000191866 133 ntBASIC17.57■□□□□ 0.4
Irf4Q64287 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.57■□□□□ 0.4
Irf4Q64287 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Irf4Q64287 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Irf4Q64287 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Irf4Q64287 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Irf4Q64287 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Irf4Q64287 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
Irf4Q64287 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.56■□□□□ 0.4
Irf4Q64287 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Irf4Q64287 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Irf4Q64287 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Irf4Q64287 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Irf4Q64287 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.56■□□□□ 0.4
Irf4Q64287 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Irf4Q64287 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Irf4Q64287 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Irf4Q64287 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Irf4Q64287 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Irf4Q64287 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Irf4Q64287 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Irf4Q64287 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
Irf4Q64287 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Irf4Q64287 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Irf4Q64287 Fst-202ENSMUST00000223640 2612 ntBASIC17.55■□□□□ 0.4
Irf4Q64287 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Irf4Q64287 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Irf4Q64287 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Irf4Q64287 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Irf4Q64287 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Irf4Q64287 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Irf4Q64287 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.55■□□□□ 0.4
Irf4Q64287 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Irf4Q64287 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Irf4Q64287 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Irf4Q64287 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Irf4Q64287 Mir5122-201ENSMUST00000175004 89 ntBASIC17.55■□□□□ 0.4
Irf4Q64287 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Irf4Q64287 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Irf4Q64287 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Irf4Q64287 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Irf4Q64287 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Irf4Q64287 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms