Protein–RNA interactions for Protein: Q62261

Sptbn1, Spectrin beta chain, non-erythrocytic 1, mousemouse

Known RBP Predictions only

Length 2,363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn1Q62261 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Sptbn1Q62261 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sptbn1Q62261 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sptbn1Q62261 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sptbn1Q62261 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sptbn1Q62261 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sptbn1Q62261 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sptbn1Q62261 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sptbn1Q62261 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.31■□□□□ 0.04
Sptbn1Q62261 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Sptbn1Q62261 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sptbn1Q62261 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sptbn1Q62261 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sptbn1Q62261 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Sptbn1Q62261 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sptbn1Q62261 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Sptbn1Q62261 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Sptbn1Q62261 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sptbn1Q62261 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Sptbn1Q62261 Gm38027-201ENSMUST00000192315 235 ntBASIC15.29■□□□□ 0.04
Sptbn1Q62261 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC15.29■□□□□ 0.04
Sptbn1Q62261 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.29■□□□□ 0.04
Sptbn1Q62261 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sptbn1Q62261 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Sptbn1Q62261 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.29■□□□□ 0.04
Sptbn1Q62261 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Sptbn1Q62261 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sptbn1Q62261 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sptbn1Q62261 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sptbn1Q62261 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sptbn1Q62261 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Sptbn1Q62261 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Sptbn1Q62261 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.29■□□□□ 0.04
Sptbn1Q62261 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sptbn1Q62261 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sptbn1Q62261 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sptbn1Q62261 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sptbn1Q62261 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sptbn1Q62261 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Sptbn1Q62261 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.29■□□□□ 0.04
Sptbn1Q62261 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sptbn1Q62261 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sptbn1Q62261 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sptbn1Q62261 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sptbn1Q62261 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sptbn1Q62261 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.28■□□□□ 0.04
Sptbn1Q62261 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sptbn1Q62261 Mir6349-201ENSMUST00000184059 97 ntBASIC15.28■□□□□ 0.04
Sptbn1Q62261 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sptbn1Q62261 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sptbn1Q62261 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sptbn1Q62261 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Sptbn1Q62261 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.28■□□□□ 0.04
Sptbn1Q62261 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sptbn1Q62261 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sptbn1Q62261 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sptbn1Q62261 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sptbn1Q62261 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sptbn1Q62261 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.27■□□□□ 0.04
Sptbn1Q62261 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sptbn1Q62261 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Sptbn1Q62261 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.27■□□□□ 0.04
Sptbn1Q62261 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sptbn1Q62261 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sptbn1Q62261 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sptbn1Q62261 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.27■□□□□ 0.03
Sptbn1Q62261 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sptbn1Q62261 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sptbn1Q62261 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sptbn1Q62261 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sptbn1Q62261 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sptbn1Q62261 Hsf1-207ENSMUST00000228371 2102 ntBASIC15.26■□□□□ 0.03
Sptbn1Q62261 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Sptbn1Q62261 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sptbn1Q62261 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sptbn1Q62261 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sptbn1Q62261 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.26■□□□□ 0.03
Sptbn1Q62261 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.26■□□□□ 0.03
Sptbn1Q62261 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.26■□□□□ 0.03
Sptbn1Q62261 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sptbn1Q62261 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sptbn1Q62261 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sptbn1Q62261 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sptbn1Q62261 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Sptbn1Q62261 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.26■□□□□ 0.03
Sptbn1Q62261 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sptbn1Q62261 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.26■□□□□ 0.03
Sptbn1Q62261 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sptbn1Q62261 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sptbn1Q62261 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Sptbn1Q62261 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Sptbn1Q62261 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.25■□□□□ 0.03
Sptbn1Q62261 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sptbn1Q62261 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sptbn1Q62261 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sptbn1Q62261 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sptbn1Q62261 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Sptbn1Q62261 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sptbn1Q62261 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.25■□□□□ 0.03
Sptbn1Q62261 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms