Protein–RNA interactions for Protein: Q62225

Cish, Cytokine-inducible SH2-containing protein, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CishQ62225 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CishQ62225 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
CishQ62225 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CishQ62225 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.12■□□□□ 0.33
CishQ62225 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CishQ62225 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CishQ62225 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CishQ62225 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CishQ62225 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CishQ62225 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CishQ62225 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CishQ62225 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CishQ62225 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CishQ62225 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CishQ62225 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CishQ62225 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CishQ62225 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CishQ62225 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.1■□□□□ 0.33
CishQ62225 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CishQ62225 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CishQ62225 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CishQ62225 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CishQ62225 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CishQ62225 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CishQ62225 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CishQ62225 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CishQ62225 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CishQ62225 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CishQ62225 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CishQ62225 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CishQ62225 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CishQ62225 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CishQ62225 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CishQ62225 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
CishQ62225 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CishQ62225 Fst-202ENSMUST00000223640 2612 ntBASIC17.09■□□□□ 0.33
CishQ62225 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CishQ62225 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CishQ62225 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CishQ62225 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CishQ62225 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CishQ62225 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.09■□□□□ 0.33
CishQ62225 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CishQ62225 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CishQ62225 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CishQ62225 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
CishQ62225 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CishQ62225 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CishQ62225 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.09■□□□□ 0.33
CishQ62225 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.09■□□□□ 0.33
CishQ62225 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CishQ62225 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CishQ62225 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CishQ62225 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CishQ62225 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.08■□□□□ 0.33
CishQ62225 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CishQ62225 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CishQ62225 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CishQ62225 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CishQ62225 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CishQ62225 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.08■□□□□ 0.32
CishQ62225 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.08■□□□□ 0.32
CishQ62225 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CishQ62225 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CishQ62225 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CishQ62225 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CishQ62225 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.08■□□□□ 0.32
CishQ62225 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CishQ62225 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CishQ62225 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CishQ62225 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CishQ62225 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.07■□□□□ 0.32
CishQ62225 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CishQ62225 Gm15375-201ENSMUST00000119510 849 ntBASIC17.07■□□□□ 0.32
CishQ62225 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.07■□□□□ 0.32
CishQ62225 Gm22240-201ENSMUST00000175225 82 ntBASIC17.07■□□□□ 0.32
CishQ62225 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CishQ62225 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CishQ62225 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CishQ62225 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CishQ62225 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.07■□□□□ 0.32
CishQ62225 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CishQ62225 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CishQ62225 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CishQ62225 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CishQ62225 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.06■□□□□ 0.32
CishQ62225 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.06■□□□□ 0.32
CishQ62225 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CishQ62225 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.06■□□□□ 0.32
CishQ62225 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CishQ62225 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CishQ62225 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.06■□□□□ 0.32
CishQ62225 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.06■□□□□ 0.32
CishQ62225 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.06■□□□□ 0.32
CishQ62225 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.06■□□□□ 0.32
CishQ62225 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CishQ62225 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CishQ62225 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CishQ62225 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CishQ62225 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms