Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Foxc1Q61572 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Foxc1Q61572 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Foxc1Q61572 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Foxc1Q61572 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Foxc1Q61572 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Foxc1Q61572 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Foxc1Q61572 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Foxc1Q61572 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Foxc1Q61572 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Foxc1Q61572 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Foxc1Q61572 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Foxc1Q61572 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Foxc1Q61572 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Foxc1Q61572 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Foxc1Q61572 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Foxc1Q61572 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Foxc1Q61572 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Foxc1Q61572 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Foxc1Q61572 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC13.13□□□□□ -0.31
Foxc1Q61572 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Foxc1Q61572 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Foxc1Q61572 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Foxc1Q61572 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Foxc1Q61572 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC13.13□□□□□ -0.31
Foxc1Q61572 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Foxc1Q61572 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Foxc1Q61572 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Foxc1Q61572 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Foxc1Q61572 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Foxc1Q61572 Gm37563-201ENSMUST00000192580 1513 ntBASIC13.13□□□□□ -0.31
Foxc1Q61572 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Foxc1Q61572 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Foxc1Q61572 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Foxc1Q61572 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Foxc1Q61572 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Foxc1Q61572 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Foxc1Q61572 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Foxc1Q61572 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Foxc1Q61572 Gm10461-201ENSMUST00000202073 4786 ntBASIC13.12□□□□□ -0.31
Foxc1Q61572 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Foxc1Q61572 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Foxc1Q61572 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Foxc1Q61572 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Foxc1Q61572 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Foxc1Q61572 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC13.12□□□□□ -0.31
Foxc1Q61572 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC13.12□□□□□ -0.31
Foxc1Q61572 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Foxc1Q61572 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Foxc1Q61572 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Foxc1Q61572 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Foxc1Q61572 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Foxc1Q61572 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Foxc1Q61572 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Foxc1Q61572 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Foxc1Q61572 Gm9954-202ENSMUST00000198686 4725 ntBASIC13.12□□□□□ -0.31
Foxc1Q61572 Gm5784-201ENSMUST00000179344 2478 ntBASIC13.12□□□□□ -0.31
Foxc1Q61572 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxc1Q61572 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC13.11□□□□□ -0.31
Foxc1Q61572 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC13.11□□□□□ -0.31
Foxc1Q61572 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxc1Q61572 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Foxc1Q61572 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Foxc1Q61572 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxc1Q61572 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Foxc1Q61572 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxc1Q61572 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxc1Q61572 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxc1Q61572 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Foxc1Q61572 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC13.11□□□□□ -0.31
Foxc1Q61572 Gm13168-201ENSMUST00000121771 632 ntBASIC13.11□□□□□ -0.31
Foxc1Q61572 Gm26524-201ENSMUST00000192339 390 ntBASIC13.11□□□□□ -0.31
Foxc1Q61572 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Foxc1Q61572 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC13.11□□□□□ -0.31
Foxc1Q61572 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Foxc1Q61572 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxc1Q61572 Gm10812-201ENSMUST00000099864 546 ntBASIC13.11□□□□□ -0.31
Foxc1Q61572 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxc1Q61572 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Foxc1Q61572 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxc1Q61572 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC13.11□□□□□ -0.31
Foxc1Q61572 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxc1Q61572 Gm43672-201ENSMUST00000199072 1731 ntBASIC13.1□□□□□ -0.31
Foxc1Q61572 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Foxc1Q61572 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Foxc1Q61572 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Foxc1Q61572 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Foxc1Q61572 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxc1Q61572 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxc1Q61572 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxc1Q61572 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxc1Q61572 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC13.1□□□□□ -0.31
Foxc1Q61572 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxc1Q61572 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Foxc1Q61572 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Foxc1Q61572 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC13.1□□□□□ -0.31
Foxc1Q61572 Gm44672-201ENSMUST00000206944 1098 ntBASIC13.1□□□□□ -0.31
Foxc1Q61572 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC13.1□□□□□ -0.31
Foxc1Q61572 Rab3c-203ENSMUST00000224180 967 ntBASIC13.1□□□□□ -0.31
Foxc1Q61572 AC135637.1-201ENSMUST00000227750 365 ntBASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms