Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.85■□□□□ 0.29
Sox17Q61473 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox17Q61473 Gm9847-201ENSMUST00000052528 599 ntBASIC16.85■□□□□ 0.29
Sox17Q61473 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sox17Q61473 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox17Q61473 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sox17Q61473 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox17Q61473 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sox17Q61473 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sox17Q61473 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox17Q61473 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Sox17Q61473 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.85■□□□□ 0.29
Sox17Q61473 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Sox17Q61473 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox17Q61473 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.84■□□□□ 0.29
Sox17Q61473 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sox17Q61473 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox17Q61473 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sox17Q61473 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox17Q61473 Mir7075-201ENSMUST00000184187 82 ntBASIC16.84■□□□□ 0.29
Sox17Q61473 Gm43173-201ENSMUST00000202246 593 ntBASIC16.84■□□□□ 0.29
Sox17Q61473 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sox17Q61473 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox17Q61473 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox17Q61473 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Sox17Q61473 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox17Q61473 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.84■□□□□ 0.29
Sox17Q61473 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox17Q61473 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox17Q61473 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox17Q61473 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Sox17Q61473 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Sox17Q61473 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.83■□□□□ 0.28
Sox17Q61473 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.83■□□□□ 0.28
Sox17Q61473 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox17Q61473 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox17Q61473 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Sox17Q61473 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox17Q61473 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sox17Q61473 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox17Q61473 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox17Q61473 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.82■□□□□ 0.28
Sox17Q61473 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox17Q61473 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sox17Q61473 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sox17Q61473 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.82■□□□□ 0.28
Sox17Q61473 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sox17Q61473 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Sox17Q61473 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox17Q61473 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox17Q61473 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sox17Q61473 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox17Q61473 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox17Q61473 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox17Q61473 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Sox17Q61473 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox17Q61473 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox17Q61473 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox17Q61473 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox17Q61473 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Sox17Q61473 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox17Q61473 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sox17Q61473 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox17Q61473 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox17Q61473 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox17Q61473 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox17Q61473 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
Sox17Q61473 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Sox17Q61473 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sox17Q61473 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox17Q61473 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.81■□□□□ 0.28
Sox17Q61473 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox17Q61473 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.81■□□□□ 0.28
Sox17Q61473 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox17Q61473 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.81■□□□□ 0.28
Sox17Q61473 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox17Q61473 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sox17Q61473 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.8■□□□□ 0.28
Sox17Q61473 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox17Q61473 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox17Q61473 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox17Q61473 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sox17Q61473 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox17Q61473 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox17Q61473 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox17Q61473 Gm40848-201ENSMUST00000221998 324 ntBASIC16.8■□□□□ 0.28
Sox17Q61473 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox17Q61473 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Sox17Q61473 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sox17Q61473 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox17Q61473 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox17Q61473 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Sox17Q61473 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox17Q61473 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox17Q61473 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.8■□□□□ 0.28
Sox17Q61473 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sox17Q61473 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.8■□□□□ 0.28
Sox17Q61473 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox17Q61473 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox17Q61473 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms